Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq13 98.7 1e-15 >seq13 Length=444513 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922 ||||| ||||||| ||| | ||||| || | | ||| ||||||||||| | || || Sbjct 129979 GCCTCCCCTGCTGCTGTTCCCTCATCCAACAAACTTGCATTTGCTATTGGAAGCCCCGTC 129920 Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982 | || || | |||||||||||||| | ||| |||||||| ||||| |||||||| Sbjct 129919 AAATCCGTCACCAGCGTTTGGTAATTCAGCAAACTCTCCAATCTACCCTGCGATATCTCT 129860 Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAG 140026 | || || || ||||| |||||||| || || || ||||| Sbjct 129859 GGCTGGTACGGTGTGTACTGCGTGTACCAGCTTGGGTTTTCAAG 129816 Score = 96.9 bits (106), Expect = 4e-15 Identities = 207/305 (68%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 139239 ATTCTTCTTGCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGAC 139298 ||||| | || ||| | | || || |||| ||||| || |||| || | | | Sbjct 130609 ATTCTGTTCGCAATATCCTTAAGCCCTTCTGGCCCATGGTACACTGCGTACATCGCTGCT 130550 Query 139299 ATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATA 139358 || ||||| ||||| || ||||| ||||| |||||||| ||||| || |||||||| ||| Sbjct 130549 ATGTTTGCCAGCAGCGCCTGTGCAGTGCAAATGTTACTTGTTGCCTTCTCTCTTCTGATA 130490 Query 139359 TGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGC-AGGATTGCCTTCGCTGTCC--ACT 139415 || ||||| | || || || || | |||||| || | | |||| | ||||| ||| Sbjct 130489 TGTTGCTCGCGTGTCTGAAGCGCCAGTCTGTAAGCTACTCTCCCCTTTG-TGTCCTTACT 130431 Query 139416 GACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAAT 139475 ||| || || | ||| || || || ||| ||||| | || | ||||| || Sbjct 130430 AACT--CCAACCAATCTTCCTGGAATTCTTCGCTTATGCGCATCAGAACACGCAAAAAAC 130373 Query 139476 GCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCA 139535 || || || || || ||||| || | | | ||||||||||| | | || ||| | Sbjct 130372 GCTGCGTGTGGCCCCCCGTACCCAAGCGACACTCCAAACCTTTGACTGTTTCCAACAACT 130313 Query 139536 ATATC 139540 ||||| Sbjct 130312 ATATC 130308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997878901440