Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7 174 2e-38 seq12 82.4 9e-11 >seq7 Length=1083452 Score = 174 bits (192), Expect = 2e-38 Identities = 570/875 (65%), Gaps = 18/875 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||||||| || | ||| | || | || ||||| ||||| || || || || || Sbjct 948349 CCACAGTACTTGATTATGAGAGTTAGCGTTGGGATCCATGGGGACGATATAGAGTCGGTT 948408 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | ||||| || ||| |||||| || |||| | || || ||||||| || || Sbjct 948409 ATTGAGACGTATAACATGATGTCGCAGAAGCTGTTTACGCATGCCTCACCAACGCTGTTT 948468 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || | |||||| | | |||||| |||| ||||| | | | | |||| ||| Sbjct 948469 AACTCGGGTACAACGCGTCCGCAGTTGTCGTCGTGCTTTTTGCTGACGATGCAGGATGAC 948528 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || || | || || || | || || | | | |||||| || ||||||| || || Sbjct 948529 TCTATTGAAGGGATTTACGATACACTGAAGCAATGTGCGATGATATCAAAGTCAGCAGGA 948588 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG--GGGACAA 75509 || ||||| || | ||| | | || || || | | |||||| | || || | Sbjct 948589 GGAATTGGTCTGAGTGTGCATAACATCAGGGC-AACAGA-CTCGTACATAGCAGGAACGA 948646 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || ||| |||| || | |||||||| || ||||| ||| ||||| | |||| Sbjct 948647 ACGGGACATCGAATGGGATAGTGCCAATGCTCCGAGTATTCAACCATACAGCAAGGTATG 948706 Query 75570 TAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 | | |||| || | || ||||| | | ||| | ||| |||| |||||||| Sbjct 948707 TGGACCAAGGAGGAAATAAGAGGCCAGGGG-CATTTGCGATATACCTGGAGCCATGGCAC 948765 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTA-CGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || || ||| | ||||| ||||||| || ||||| || | || ||| || Sbjct 948766 GCGGACATCTTTGAGTTT-TTGAGTTTGCGCAAGAACCACGGAAAGGAGGAGAACAGGGC 948824 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | || | |||| |||||||||| || | || ||||||||||| ||| Sbjct 948825 ACGTGACTTGTTTTATGGAATGTGGATTCCGGATTTGTTTATGAAGCGGGTGCTGGACAA 948884 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 | | | ||| | | ||||| ||| || |||| ||| ||| ||| | ||| || Sbjct 948885 TAGGGACTGGAGTTTGTTCTGCCCACACGAGGCGCCAAATCTACACGAGGTTTGGGGAGA 948944 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG---GAGGGTAGAGCCAATGCGACTGT 75861 ||||||||| || | ||||||||||| || | ||||| || | || || Sbjct 948945 GGAGTTTGAGGCATTGTACACAAAGTACGAGAACACAGAGGGGCTGGCAAGAAAGAAGGT 949004 Query 75862 ACCAGCC--GCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 ||||| || | ||| || | || ||||| | || |||| || || |||||||| Sbjct 949005 TCCAGCACAGCAGCTGT--GGTACGCGATTCTGGACTCGCAGATTGAAACAGGAACACCG 949062 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979 || ||||| ||||| ||||| || || ||| ||||| |||| |||| |||||| Sbjct 949063 TACATGCTGTACAAAGATGCGTGCAATGGCAAGTCAAACCAGCAGAACCTGGGTACAATC 949122 Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039 |||||||| ||| | || || || ||| | |||||||| || || ||| ||| ||| Sbjct 949123 AAGAGCTCCAATTTGTGTACAGAGATTGTCGAGTACACGTCAAACGACGAGGTGGCGGTT 949182 Query 76040 TGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 ||||| ||||| ||||| || || ||| || ||| Sbjct 949183 TGCAACTTGGCGTCAATTGCACTGCCAGCGTTTGT 949217 >seq12 Length=1112767 Score = 82.4 bits (90), Expect = 9e-11 Identities = 201/302 (67%), Gaps = 2/302 (1%) Strand=Plus/Plus Query 14358 TGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAGAATC 14417 ||| |||||| ||||||| ||| | ||| | || || | |||||| | || | Sbjct 186110 TGGTGGATGGATTCAAGCCGGGCCAGCGCAAAATCATCTACGGGTGCTTCAAGCGAAACC 186169 Query 14418 TCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACC 14477 ||||| ||||| |||||||| |||||||| || || |||| | | ||||||| Sbjct 186170 TCAAGAGCGAAATCAAGGTGGCTGCACTGGCGGGGTACGTGTCGGAACAAACCGCGTACC 186229 Query 14478 ACCATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGGGTT 14537 |||| ||||| ||||| | | |||| || |||||| | |||||| ||| Sbjct 186230 ACCACGGTGAGCAGTCCTTGACTCAGTCGATAATTGTGTTGGCGCAGGACTACGTGGGCA 186289 Query 14538 CAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTGGTA 14597 |||||| | ||| | ||||| || | || || ||||| || | || ||| || | Sbjct 186290 GCAACAACCTCAACGTGCTTGAGCCAAGAGGCCAGTTTGGAACTAGGCTGCAGGGCGGAA 186349 Query 14598 AGGATGCT-TCTCAGACGAGGTACATTTTCACAAAACTTACCAAGGAGGCTCGCAAGATC 14656 | |||||| ||| | | | ||||| ||||| | | | |||| | | ||||| ||| Sbjct 186350 AAGATGCTGCCTCCG-CACGTTACATCTTCACCACTTTGAGCAAGCTGACACGCAATATC 186408 Query 14657 TT 14658 || Sbjct 186409 TT 186410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569063087360