Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq56 96.9 6e-15 >seq56 Length=671324 Score = 96.9 bits (106), Expect = 6e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || |||||||| || || | ||| || | ||| || ||||||||||| || | Sbjct 567790 ATGTTGTAGTCGGACAAGGTACGGCCATCCTCAAGTTGCTTACCGGCAAAAATCAAACGT 567731 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || ||||| || || |||||||| ||||| || || || ||| | || || ||| Sbjct 567730 TGCTGATCTGGGGGAATTCCTTCCTTATCCTGGATCTTTTGTTTAACGTTATCGATGGTA 567671 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || ||||| || || || || || || || || || ||||| || |||||||| || ||| Sbjct 567670 TCTGAAGATTCCACCTCGAGGGTGATGGTCTTCCCAGTTAGTGTCTTTACAAAAATCTGC 567611 Query 193359 ATTTTA 193364 ||| || Sbjct 567610 ATTCTA 567605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653590311040