Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq56 95.1 2e-14 >seq56 Length=671324 Score = 95.1 bits (104), Expect = 2e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878 || |||||| || ||| | || ||| | ||||| || || || || | || || ||| Sbjct 567605 TAGAATGCAGATTTTTGTAAAGACACTAACTGGGAAGACCATCACCCTCGAGGTGGAATC 567664 Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938 ||| |||| || ||||| ||| | || || || ||||| ||||| || || ||||| Sbjct 567665 TTCAGATACCATCGATAACGTTAAACAAAAGATCCAGGATAAGGAAGGAATTCCCCCAGA 567724 Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998 || ||| | ||||||| |||||||||||| || || ||| | | || || || || || Sbjct 567725 TCAGCAACGTTTGATTTTTGCCGGTAAGCAACTTGAGGATGGCCGTACCTTGTCCGACTA 567784 Query 155999 TAATATATCCAAA--GAGGCGACGCTTCATTTAGT 156031 | | ||||||| || | || ||||| || || Sbjct 567785 CA--ACATCCAAAAGGAATCCACTCTTCACTTGGT 567817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871341315200