Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq16 116 5e-20 >seq16 Length=823159 Score = 116 bits (128), Expect = 5e-20 Identities = 205/295 (69%), Gaps = 8/295 (3%) Strand=Plus/Plus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 |||||||||||||||||||| | | || |||| ||||| | || || || || Sbjct 376817 TCGAAAAAGTTGGTCTTGCCTTGCATTGAAATCATGTCCATAAAGTCAAATGGATTCTGC 376876 Query 868778 GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATG 868837 | |||||||| || | |||| || | |||||| | ||||| |||||||| ||| Sbjct 376877 GAGTTGTAGTGTTTGGAGAATCCCAGAGCTATGAGCAGTCTATCGGCAACAAACTCAATG 376936 Query 868838 TACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACA 868897 || |||||||| || | |||||| ||||| |||| || |||| |||||| ||| Sbjct 376937 TATTGGCACATCAGTGCACTGTTCATTCCGATCAGCGATACTGGCAACGACTCTGTCAAG 376996 Query 868898 AACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTCGGCC---GAG 868954 |||| || || || | || ||||| | | || |||| || | |||| || Sbjct 376997 AACTTTTGTTCAATGACAACAGCCTCAAGCACAATGCCCCTG---ACCTTGGCCTCAGAA 377053 Query 868955 GGCTTGTTGACGAGCATCG-TGTAGAGCAGGCAGGCAAAGTCGCAGTGCAACCCT 869008 ||||||||| ||| || | || | ||||| ||||||||||| ||| |||||| Sbjct 377054 GGCTTGTTGCTGAG-ATGGCTGAATAGCAGACAGGCAAAGTCTGTGTGTAACCCT 377107 Score = 102 bits (112), Expect = 1e-15 Identities = 197/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694 ||| |||||||| || ||| ||||| || || || || |||||| | || || Sbjct 377389 GTGAATGTTCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATCTGTAC 377448 Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754 ||| || | || || ||||||| || || || || || ||| || || || Sbjct 377449 CTCATTGCTAAAGTTGCTCACCAGGTTTTCATTGACAATTCCATCCGAGGCAGCAAAGAA 377508 Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACGGT 869814 || |||| || ||||||||||| ||||||| || ||| ||||||| | | Sbjct 377509 TGCTAGGATGTTCTTGATAAAGTAACGCTCGTGTTCTGAAAGCTTTTCCCAGTGTATTTT 377568 Query 869815 GTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACAT 869874 ||| ||| ||||||||||| ||| |||||| || || || |||||||||||||| Sbjct 377569 GTCATGTGAGAGATCCACCTCCTCAGCGTTCCAGAAAGACGCTTCCGCCTTTTTGTACAT 377628 Query 869875 CTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTT 869925 | ||| || | ||||| ||| ||||| || ||||| | | | ||||| Sbjct 377629 ATTCCACACCTCATGGTACTTGATTGGGAACAGCACAAATCTGCTTGGGTT 377679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107133291342824