Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq16 86.0 5e-12 >seq16 Length=823159 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CC 110328 |||||||| || ||||||||||| | || || ||||| |||||| | || ||| || Sbjct 229372 AAAATGCAGATCTTTGTCAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCC 229313 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | | || || ||| | | || || || |||||| || || || || | || || Sbjct 229312 TCA-GACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGA 229254 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 |||||| | | |||| ||| || ||||| || ||||||| | | || || | || || Sbjct 229253 CCAACAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTA 229194 Query 110449 CAACATTCAAAAAGAATCTAC 110469 |||||| ||||| || ||||| Sbjct 229193 CAACATCCAAAAGGAGTCTAC 229173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841237731496