Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq29 376 2e-98 seq5 194 1e-43 seq14 163 2e-34 >seq29 Length=252028 Score = 376 bits (416), Expect = 2e-98 Identities = 1055/1597 (66%), Gaps = 23/1597 (1%) Strand=Plus/Plus Query 281313 CTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTC 281372 |||||| | || || ||| || | ||||| | ||||| | |||| |||| | | Sbjct 107087 CTTCTTGTACTT-TTCAGCCTCATTGATCATGCGTTCAATATCTTCTTTGGAGAGACGGC 107145 Query 281373 CGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCA 281432 | || ||||| || || || || || || || || | || ||| | |||| | Sbjct 107146 CTTTATCGTTAGTGATGGTGATCTTGTTTGACTTTCCGGTGGTCTTGTCAACAGCAGAGA 107205 Query 281433 CATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCT 281492 | || || |||||||||||||| | ||||| |||||||| | |||||| || || | Sbjct 107206 CGTTGAGGATACCATTGGCATCGACGTCAAAGGTGACTTCGACTTGAGGAACACCGCGAG 107265 Query 281493 GAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATT 281552 |||| || || || || | | || | || || | || || || || || | Sbjct 107266 GAGCTGGGGGAATTCCGGAGAGTTCGAACTTACCAAGCATGTTGTTGTCCTTGGTTCTTG 107325 Query 281553 TTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAA 281612 | |||||||| || | | ||||| || | | ||| ||||| | ||||| | | Sbjct 107326 TACGTTCACCTTCATAGACCTGGATGAGGACACCTGGTTGGTTATCGGCGTAAGTGGAGA 107385 Query 281613 ATACTCT-GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 281671 | | ||| ||| || || ||||||| || ||||| | | || | ||||| | | Sbjct 107386 AGA-TCTCGGACTTCTTGCAAGGAACAGTGGTGTTGCGCTTGATGAGGGCAGTCATGACA 107444 Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731 |||||||| || || | ||||||||||| || | ||||||| || | || | ||| Sbjct 107445 CCACCAGCAGTCTCAATGCCAAGAGAAAGCGGGGCAACATCAAGAAGCAAAAGGTCTTGG 107504 Query 281732 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791 || || ||| | |||| |||||| || || |||| ||| || ||||| |||||| Sbjct 107505 GTCTTCTCGGAAGTGTCACCAGTAAGAATGGCGGCCTGAACAGCGGCTCCATAAGCAACA 107564 Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 281851 || ||||||||||| | | | | |||| ||| || ||||| || | |||| | | Sbjct 107565 GCCTCATCAGGATTGATGGACTTGTCGAGTTCTTTTCCGTTGAAGAAGTCAGAAATCATT 107624 Query 281852 TGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 | ||| ||||| |||||||| | ||||| ||||| | |||||||| || ||||| Sbjct 107625 T-TCTGCACCTTTGGAATACGGGTGGATCCACCAACAAGAACAATTTCGCTGACTTGTGA 107683 Query 281911 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAA 281970 || || || | || | || || || || || |||||| || ||| ||||| Sbjct 107684 CTTGTCGCACTTGGCGTCTCTGAGCACCTTCTCTACTGGGTCAAGAGTAGATCTGAACAA 107743 Query 281971 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCT 282028 ||| |||||||| || ||| | || || ||| | || || || ||||| Sbjct 107744 GTCATTGTTGAGTTCTTCAAAACGAGCACGTGT--GATTGAAGTGTAGAAATCTGTTCCT 107801 Query 282029 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 || |||||| || | ||||| || ||||| || | || | || ||| || || Sbjct 107802 TCAAACAAACTGTCGATTTCAACTGTGGTTTGTGTTGCGCTTGACAATGTACGCTTTGCT 107861 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC--TGATTGATTCAAATCTGTTT 282146 | |||||||||||| || | | || | ||| ||| | |||| || || | | Sbjct 107862 CTTTCACATGCTGTTCTCAAACGACGAAGTGCTCTTGGGTTCTTTGA--CATGTCCTTCT 107919 Query 282147 TATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCA 282205 | | || | |||||| |||||| | | | ||| ||||| | || ||||| ||||| Sbjct 107920 TGAACTTGCGCTTGAACTCTTCA-CTGAAAAAGTTCACAAGTCTGTTGTCAAAGTCTTCT 107978 Query 282206 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 282265 || ||||| | || | ||||| || | | || | ||||| || ||||||| ||| Sbjct 107979 CCCCCCAAATGTGTGTCTCCTGCTGTTGACTTGACCTCGAAAATCCCGTCTTCAATTGAC 108038 Query 282266 AAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 282325 | | | ||| ||| ||||| || |||| |||||| || | ||| | | ||| Sbjct 108039 AGCAACGAAACGTCAAATGTTCCGCCTCCCAAATCAAATATCAATACCAACTTCTCTCCA 108098 Query 282326 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385 || || || || || ||||| || | || || || ||||| || |||||||| | Sbjct 108099 ACTGCCTTCTTGTCCAGTCCATATGCTATCGCTGCTGCTGTTGGCTCGTTAATAATACGG 108158 Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445 | || || | || ||||| |||||||| || || |||||||| || ||||||||| Sbjct 108159 AGCACGTTCAATCCTGCAATAAGCCCTGCATCCTTTGTTGCTTGTCTCTGCGAATCGTTA 108218 Query 282446 AAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCT 282505 || ||||| || || || | ||| ||||| | |||||| |||||||| | || |||| Sbjct 108219 AAGTATGCTGGTACTGTTACAACTGCATCCTTCACTTCTGTTCCAATAAATGCCTCTGCT 108278 Query 282506 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGAT 282565 || | ||||| || | || ||||| ||||| | | ||||| | || ||| | Sbjct 108279 GTCTCCTTCATCTTTGTCAATATCATCGATGATACCTCCTCTGGGCTAAATGTCTTTGTC 108338 Query 282566 TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA--ACTTTAAATG 282623 || | || ||| | | ||| | || || | | | | || || ||| Sbjct 108339 TCTCCCTTGTACTCTACCTGGCACATTGGCT--TTCCCCCCTCTGACACCACCTTGTATG 108396 Query 282624 GCCAATATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGT 282682 | | ||||| |||||||| || || || |||| ||| | ||||| || || Sbjct 108397 AAAAGTGCTTCATGTCTGATTGCAC-CTCTGCCTCATCAAACCGACGCCCAATCAACCGC 108455 Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742 || | ||||| | || || ||||| || | ||| | || | || ||||||||||| Sbjct 108456 TTAACGTCAAACACTGTGTTTGTTGGGTTCATTGCCACCTGGTTCTTTGCTGCATCTCCC 108515 Query 282743 ATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 282801 | || || | || |||||||||| ||||| ||||| ||||| || ||||||||||| Sbjct 108516 ACCA-ATCTCTCATCATCTGTAAATGCTACATACGATGGTGTTGTACGGTTACCTTGATC 108574 Query 282802 ATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCC 282861 ||| ||||| || || ||| | ||||||||||||| || ||||| | |||||||| Sbjct 108575 ATTTGCAATTATCTCTACTCTGTCATTTTGCCATACTCCCACACATGAGTATGTTGTTCC 108634 Query 282862 TAAATCAATACCAATAGCAATTTTATCTGACATTATT 282898 ||||| || |||||||| || | |||||||| || Sbjct 108635 CAAATCTATTCCAATAGCTTTTGTTCCTGACATTTTT 108671 >seq5 Length=1009252 Score = 194 bits (214), Expect = 1e-43 Identities = 469/696 (67%), Gaps = 18/696 (3%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 ||||||||||||| |||||||| | |||| ||| || || || ||||| || | | Sbjct 523578 TTATCAAAATCTTGTCCTCCCAAATGGGTATCTCCGGATGTGGCCAATACTTCAAACACT 523519 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||||| |||| || | ||| | |||||| |||||||| |||| |||| | | | Sbjct 523518 CCATCATCAATAGCGAGAAGCGATACATCAAAAGTTCCACCTCCCAGATCATATACCA-- 523461 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 | || | ||| | ||| || || || | ||| || |||| || || || |||||| Sbjct 523460 AAATGTGTCTCTCTC-CTTCCTTCTTGTCCAAACCGTAAGCAATGGCTGCTGCTGTTGGT 523402 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| | |||||| | || ||||| || | ||| |||||| ||||| ||||||||| Sbjct 523401 TCATTTACAATTCTGAGCACGTTAAGTCCTGAAATGGCTCCTGCGTCTTTGGTGGCTTGT 523342 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTT--CTTTTC 282488 ||||| | ||| || || || || || || | |||||| | |||||||| | ||| Sbjct 523341 CTTTGGGCATCTGAGAAGTAGGCTGGTACTGTTACAACGGCGTGTGTTACTTTGGTGTTC 523282 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 | ||| || || ||| ||||| || || | ||||| ||||| || ||||| Sbjct 523281 AAGTAT--GCCTCAGCGATTTCCTTCATCTTTGACAATACCATTGCTGAAACTTCTTCTG 523224 Query 282549 GAGAATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGG--TTTATTACCAA 282605 | | || ||| ||| | ||||| || |||||||| ||| | | || Sbjct 523223 GTGTGAATGTCTTCTTTTCGTCATTGAT-TGTAACTTCAAACACTGGACGGTTTGACTTG 523165 Query 282606 CATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 282665 | | ||| | ||||||||| | ||||| || | ||| | ||||||||| | Sbjct 523164 CCCT--TAAGTGAAAATGGCCAGTTCTTCATGTCACGCTTAACTTCCTTGTCATTAAAGT 523107 Query 282666 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGAT 282725 | || || || || || | ||||| | || || ||| || || ||||||| Sbjct 523106 TCATTCCGATCAAACGCTTGGAGTCAAACAGTGTGTTTTCTGGGTTGCTGGCGGCTTGAT 523047 Query 282726 ATTTGGCTGCATCTCCAATCAGATGTTC--TGT-CTCTGTAAATGAAACATATGATGGAG 282782 |||||||||||||||| || || ||| || || | | ||||||||||| | Sbjct 523046 TCTTGGCTGCATCTCCAACAAGTCTCTCGTTGTCCTTGGTCCAGGCTACATATGATGGGG 522987 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATT-TTGCCATACACCT 282841 | | || || ||||| || || ||||||||||| || |||||| ||| | ||||| Sbjct 522986 TAATACGGTTTCCTTGCTCGTTGGCAATAATTTCTACACGACCATTCTTGTGA-ACACCA 522928 Query 282842 ACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 282877 ||||| | |||||||| ||||||||||||||| Sbjct 522927 ACACAGGAGTATGTTGTTCCCAAATCAATACCAATA 522892 >seq14 Length=408299 Score = 163 bits (180), Expect = 2e-34 Identities = 461/697 (66%), Gaps = 16/697 (2%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||||||||| |||||||| | || | ||| | || || ||||| ||| | | Sbjct 321116 TTGTCAAAATCTTCTCCTCCCAAATGGGTGTCTCCGGCTGTTGCCTTTACTGAGAAGATT 321175 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || | || | | | ||||||| |||||||| |||| ||||||||| | Sbjct 321176 CCTCCTGTGATTGAAAGCAATGAAACATCAAAAGTTCCACCTCCCAAATCAAAAATCAAA 321235 Query 282311 ACATTCATTTCTTTGTCTTGGTTTT--TATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 || | | |||| || || | || | || | |||||| |||| ||| || || |||| Sbjct 321236 ACTTGC--TTCTCGGTTGTGCTCTTGGTGTCCAAACCATAAGCAATAGCTGCGGCTGTTG 321293 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | || || ||||| | || ||| | ||| || | ||| |||| ||||| || ||||| | Sbjct 321294 GCTCGTTGATAATACGCAGAACCTCAAGTCCTGAGATTGTTCCGGCATCCTTGGTGGCAT 321353 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT-TCTTTT 282487 | || || ||| |||| || || || || || || ||||| | | || ||||| Sbjct 321354 TACGCTGGGAGTCGCTAAAGTAGGCTGGTACTGTGATGACGGCCTTCTTGACGGTCTTTC 321413 Query 282488 CCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 282547 |||| | || |||| | ||||| || | |||||||||||||| || | || | Sbjct 321414 CCAACTTG-GCTTCTGCTACCTCCTTCATCTTGATCAAAATCATTGATGAGATCTCTTGT 321472 Query 282548 GGAGAATATTGCTTGGATTCATTT-TGATATGATACTTCAAAATATGGTTTA---TTACC 282603 || || ||| ||| || ||| | | || | || |||| | || | Sbjct 321473 GGTGAGAATTCCTTCTTCTCGCCACTGACTTCAACCTGGATAA-ATGGCTGTGCGTTGCG 321531 Query 282604 AACATTAATAACTTTAAATGGCCAATATTTCATATC-TGATTGAACACTTTGGTCATTAA 282662 | | ||| || |||||||| | | || | |||| | || ||||| || Sbjct 321532 GTCT---ACAACCTTGAATGGCCAGTGAGCACTGTCCTTCTTGA-CGTGTTCGTCATCAA 321587 Query 282663 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTT 282722 || | |||||| || || || | ||||| | || |||| ||| || | ||| | | Sbjct 321588 AACGACGACCAATCAAACGCTTAACGTCAAATACTGTGTTGGCTGGGTTCATTGCCGACT 321647 Query 282723 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 282782 | | ||||| |||||||| | || | | |||| ||||| || | |||||||||||| | Sbjct 321648 GGTTCTTGGCGGCATCTCCTACCAAACGCTCTGAATCTGTGAAAGCAACATATGATGGTG 321707 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 | || || |||||||| ||||| ||||| ||||| ||| | || || ||| || | | Sbjct 321708 TGGTACGGTTACCTTGCTCATTGGCAATGATTTCTACTCTCTCACCTTCCCAAACTGCAA 321767 Query 282843 CACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 |||| | |||||||| | ||| ||||| ||||| Sbjct 321768 CACATGAGTATGTTGTTCCAAGATCGATACCGATAGC 321804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740626865104272