Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq7 122 2e-22 seq67 84.2 5e-11 >seq7 Length=1083452 Score = 122 bits (134), Expect = 2e-22 Identities = 261/387 (67%), Gaps = 5/387 (1%) Strand=Plus/Plus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 || ||| | || |||||| | || || | ||||| ||||||||||| ||||| ||| Sbjct 948490 CAGTTGTCGTCGTGCTTTTTGCTGACGATGCAGGATGACTCTATTGAAGGGATTTACGAT 948549 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 | || || || ||| | || || || | |||||||||||| | || ||| Sbjct 948550 ACACTGAAGCAATGTGCGATGATATCAAAGTCAGCAGGAGGAATTGGTCTGAGTGTGCAT 948609 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 | || | ||| || | | || ||| | |||| || | || | ||| | || Sbjct 948610 AACATCAGGGCAACAGACTCGTACATAGCAGGAACGAACGGGACATCGAATGGGATAGTG 948669 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGA 110747 |||||| | |||| |||||| | || |||| |||||| | ||||| || |||||| Sbjct 948670 CCAATGCTCCGAGTATTCAACCATACAGCAAGGTATGTGGACCAAGGAGGAAATAAGAGG 948729 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || ||||||| || || || || || ||||| | || || ||||| || || || Sbjct 948730 CCAGGGGCATTTGCGATATACCTGGAGCCATGGCACGCGGACATCTTTGAGTT-TTTGAG 948788 Query 110808 CTT-CGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTG 110866 || || || || || ||| || || | || |||||||| || ||||||| |||||| Sbjct 948789 TTTGCGCAAGAACCACGGAAAGGAGGAGAACAGGGCACGTGACTTGTTTTATGGAATGTG 948848 Query 110867 GATTTCAGATTTATTCATGAAACGTGT 110893 |||| | ||||| || ||||| || || Sbjct 948849 GATTCCGGATTTGTTTATGAAGCGGGT 948875 >seq67 Length=989454 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 ||||| ||||||| ||| || |||| || || || || || ||||||| | || Sbjct 442366 AGACACATGAATGATGGAGATATTGTGTTGTTTAACAGACAGCCGTCGCTGCATAGACTG 442307 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTG-GATTGACATTTCGATTAAATGTAAG 305424 || || ||||| |||| || | | | | | | | ||| ||| | || || | | Sbjct 442306 TCGATCATGGCGCATAGAG-CGAGGATCAAGCCGTGGCGGACGTTTAGGTTTAACGAGTG 442248 Query 305425 TGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484 || ||||||||||| |||||||||||||||||||| ||||||||| ||||| | || || Sbjct 442247 TGTGTGTACGCCTTACAATGCGGATTTTGATGGAGACGAAATGAATCTGCATTTGCCGCA 442188 Query 305485 ATCAAAGG 305492 || ||| Sbjct 442187 GACAGAGG 442180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811705165192