Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq16 217 2e-51 >seq16 Length=823159 Score = 217 bits (240), Expect = 2e-51 Identities = 591/897 (66%), Gaps = 21/897 (2%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| || ||| ||||| |||||||| || || ||||||| || ||| || | Sbjct 376793 TTCTGGTAGTCGGAAACACGTTTTTCGAAAAAGTTGGTCTTGCCTTGCATTGAAATCATG 376852 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || ||||| ||||| | || || | ||| ||||| | || | | Sbjct 376853 TCCATAAAGTCAAATGGATTCTGCGAGTTGTAGTGTTTGGAGAATCCCAGAGCTATGAGC 376912 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | |||||| |||||||| || |||||| ||||| | ||| |||||||| || || Sbjct 376913 AGTCTATCGGCAACAAACTCAATGTATTGGCACATCAGTGCACTGTTCATTCCGATCAGC 376972 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 ||||| | | ||| || | |||| || ||| ||| | || ||||| | | Sbjct 376973 GATACTGGCAACGACTCTGTCAAGAACTTTTGTTCAATGACAACAGCCTCAAGCA----C 377028 Query 39566 GATGTTACT-ACCT---CATCACTCGG-TGGATGCAATAAATGTTTAAACATTAAGCAGG 39620 ||| || |||| | ||| || | | ||| | ||| | || | | |||| Sbjct 377029 AATGCCCCTGACCTTGGCCTCAGAAGGCTTGTTGCTG-AGATGGCTGAATAGCAGACAGG 377087 Query 39621 CGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAG 39680 | ||||| |||| || ||||| | | ||| | || || || ||||| ||||| | Sbjct 377088 CAAAGTCTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTCCTG 377147 Query 39681 GCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGC 39740 |||| || || | |||||||||||| || || || ||||| ||||| |||||||| || | Sbjct 377148 GCATCAGCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAATAC 377207 Query 39741 CTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGT-----ATCATTATGTAT 39795 | || ||| ||||||| || | | | ||| || || | || ||| | || || Sbjct 377208 CCTCAACTACTGCAAACGCCGCCAAACGCTCACC--AAATGGTGCCTCATCGTCATCAAT 377265 Query 39796 CCACTTCTGTGCCCAATCAGC--TTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 ||||||| | ||||| | || ||||| | | ||| || || | || || || ||| Sbjct 377266 CCACTTCAGGGCCCACTTTGCCTTTTCTCCAATGCAC--GGAATGTTGTCAATTGCGTTA 377323 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || || | | || || | ||||| || ||||| || | | ||| |||||| Sbjct 377324 AACAGGTGGTTCTTCTCTGCCTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTACATT 377383 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || ||||| |||||| || || || || || ||||||||||| || | ||| Sbjct 377384 TCGCTGTGAATGTTCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATC 377443 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 |||||||| | ||| | | ||| |||||||| || |||||||| || ||| Sbjct 377444 TGTACCTCATTGCTAAAGTTGCTCACCAGGTTTTCATTGACAATTCCATCCGAGGCAGCA 377503 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCA 40093 || ||||| | | | || ||||| || || | || | || | ||||| Sbjct 377504 AAGAATGCTAGGATGTTCTTGATAAAGTAACGCTCGTGTTCTGAAAGCTTTTCCCAGTGT 377563 Query 40094 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTG 40153 | | || | ||| | ||| || || ||||| |||| || ||||| || ||||||||| Sbjct 377564 ATTTTGTCATGTGAGAGATCCACCTCCTCAGCGTTCCAGAAAGACGCTTCCGCCTTTTTG 377623 Query 40154 TACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTT 40210 ||||| ||||| | ||| | || | ||||| || | |||||||| |||| ||| Sbjct 377624 TACATATTCCACACCTCATGGTACTTGATTGGGAACAGCACAAATCTGCTTGGGTTT 377680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908181782080