Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq16 232 5e-56 >seq16 Length=823159 Score = 232 bits (256), Expect = 5e-56 Identities = 615/921 (67%), Gaps = 30/921 (3%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || ||||| |||| ||||| | || ||||| | ||| | ||||||||||| || | Sbjct 377670 AGATTTGTGCTGTTCCCAATCAAGTACCATGAGGTGTGGAATATGTACAAAAAGGCGGAA 377611 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGG--ATTG 43814 ||||| || |||| || || || || ||| | | | ||| | ||| ||| | | Sbjct 377610 GCGTCTTTCTGGAACGCTGAGGAGGTGGATCTCTCACATGACAAAATACACTGGGAAAAG 377551 Query 43815 CATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCG 43874 | || | | ||| || || ||||| | | || || |||||||| | Sbjct 377550 CTTTCAGAACACGAGCGTTAC--TTTATCAAGAACATCCTAGCATTCTTTGCTGCCTCGG 377493 Query 43875 ACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA-GAAGTTCAATTACCAGAA 43933 | || || ||||||||||| |||| || ||| |||| || || || | ||||| Sbjct 377492 ATGGAATTGTCAATGAAAACCTGGTGAGCAACTTTA-GCAATGAGGTACAGATTCCAGAG 377434 Query 43934 GCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGT 43993 ||| ||||||| |||||||| ||||| || || || ||||| ||||||||| Sbjct 377433 GCAAGATGTTTCTATGGGTTCCAAATCATGATTGAGAACATTCACAGCGAAATGTACTCA 377374 Query 43994 CTTCTGATAGATACGTACATCAAAGATG-GGCACGAGAAGCATCGATTGTTTAATGCGAT 44052 || ||| | || || ||||| |||||| |||| |||||| | | ||||||| || || Sbjct 377373 CTGCTGCTGGACACATACATTCAAGATGAGGCA-GAGAAGAACCACCTGTTTAACGCAAT 377315 Query 44053 AGA-AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA 44111 || |||| | | ||| ||| | | || ||| | |||||||| || ||||| || Sbjct 377314 TGACAACATTCCGTGC-ATTGGAGAAAAGGCAAAGTGGGCCCTGAAGTGGATTGATGACG 377256 Query 44112 ATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168 |||| | ||||| || || | | ||||||||||| || || || |||||||||| Sbjct 377255 ATGAGGCACCATTTGGTGAGCGTTTGGCGGCGTTTGCAGTAGTTGAGGGTATTTTCTTTT 377196 Query 44169 CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGT 44228 ||||||||||||| || || || ||| | || || |||| ||||||| || | || | Sbjct 377195 CAGGATCGTTTGCAGCAATTTTCTGGCTCAAAAAGAGAGGGCTGATGCCAGGACTTACAT 377136 Query 44229 TTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTAC 44288 | || |||||| | || | || |||||||| ||||| || ||||| || || || Sbjct 377135 TCTCCAATGAGCTTATTTGCCGCGATGAAGGGTTACACACAGACTTTGCCTGTCTGCTAT 377076 Query 44289 TTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAA--TTACAGATATTGTTGTAGA 44346 | | |||| | | | |||||||| || | | ||| | | | ||||| | || Sbjct 377075 TCAGCCATCTCAG---CAACAAGCCTTC-TG-AGGCCAAGGTCAGGGGCATTGTGCTTGA 377021 Query 44347 GGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAAT 44406 ||| || || |||||| | || ||||| | || || ||| | || ||||| Sbjct 377020 GGCTGTTGTCATTGAACAAAAGTTCTTGACAGAGTCGTTGCCAGTATCGCTGATCGGAAT 376961 Query 44407 GAA---TGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGA 44463 ||| || || ||||| |||||| ||||| | |||| ||| | | || | | Sbjct 376960 GAACAGTGCAC---TGATGTGCCAATACATTGAGTTTGTTGCCGATAGACTGCTCATAGC 376904 Query 44464 ACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTC 44523 ||||| | | |||||||| | || || || ||||| |||||||| | ||||| Sbjct 376903 TCTGGGATTCTCCAAACACTACAACTCGCAGAATCCATTTGACTTTATGGACATGATTTC 376844 Query 44524 GTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATG--GGC 44581 || ||||||| || |||||||| |||||||| ||| || || || ||| | || Sbjct 376843 AATGCAAGGCAAGACCAACTTTTTCGAAAAACGTGTTTCCGACTACCA--GAAGGCTGGT 376786 Query 44582 GTCATGATAACAAGTGACAAT 44602 |||||||| |||| |||| Sbjct 376785 GTCATGATGGGTAGTGGCAAT 376765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455651232360