Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7 190 3e-43 >seq7 Length=1083452 Score = 190 bits (210), Expect = 3e-43 Identities = 574/877 (65%), Gaps = 22/877 (3%) Strand=Plus/Minus Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 ||| || ||| || || ||||| ||||| |||||||| ||| ||| || || ||| Sbjct 949217 ACAAACGCTGGCAGTGCAATTGACGCCAAGTTGCAAACCGCCACCTCGTCGTTTGACGTG 949158 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340 ||||| | ||| |||||||| || ||||| ||||| || || |||| |||| ||||| Sbjct 949157 TACTCGACAATCTCTGTACACAAATTGGAGCTCTTGATTGTACCCAGGTTCTGCTGGTTT 949098 Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400 ||| ||||||||||| ||||| |||||||| || || || || || |||| || Sbjct 949097 GACTTGCCATTGCACGCATCTTTGTACAGCATGTACGGTGTTCCTGTTTCAATCTGCGAG 949038 Query 111401 TTGAGAATAGCCTTCCAAACATCGGC--GGCTGGTACAATGGCGTTGGCCCGTCCCTCCG 111458 | ||||| || | || ||| | || ||||| || | | ||| | ||||| | Sbjct 949037 TCCAGAATCGCGTACC--ACAGCTGCTGTGCTGGAACCTTCTTTCTTGCCAGCCCCTCTG 948980 Query 111459 ---CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515 ||||||||||||||| | || ||||||||||| ||| | ||| ||| || Sbjct 948979 TGTTCTCGTACTTTGTGTACAATGCCTCAAACTCCTCTCCCCAAACCTCGTGTAGATTTG 948920 Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575 | |||| || ||| ||||| | | ||| | | | ||| ||||||||||| || | Sbjct 948919 GCGCCTCGTGTGGGCAGAACAAACTCCAGTCCCTATTGTCCAGCACCCGCTTCATAAACA 948860 Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 111635 || |||||||||| |||| | || | || ||| || | || |||| Sbjct 948859 AATCCGGAATCCACATTCCATAAAACAAGTCACGTGCCCTGTTCTCCTCCTTTCCGTGGT 948800 Query 111636 TGAGTCG-TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694 | || ||||||| ||||| | ||| ||||||||||||||||| || || | || Sbjct 948799 TCTTGCGCAAACTCAA-AAACTCAAAGATGTCCGCGTGCCATGGCTCCAGGTATATCGC- 948742 Query 111695 ATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 111748 | || || | | | | || |||| | ||||| | ||||| ||| ||| Sbjct 948741 --AAATGCCCCTGGCCTCTTATTTCCTCCTTGGTCCACATACCTTGCTGTATGGTTGAAT 948684 Query 111749 ACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCC--CCGAATACGAGATT 111806 || || |||||||| | || |||| ||| || || || || | |||||| | Sbjct 948683 ACTCGGAGCATTGGCACTATCCCATTCGATGTCCCGTTCGTTCCTGCTATGTACGAG-TC 948625 Query 111807 TATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCG 111866 | || || || | | ||| | || ||||| || || || ||||||| || || Sbjct 948624 TGTT-GCCCTGATGTTATGCACACTCAGACCAATTCCTCCTGCTGACTTTGATATCATCG 948566 Query 111867 CACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGA 111926 |||| | | | || || | || || || | || ||||| |||| | | | | | Sbjct 948565 CACATTGCTTCAGTGTATCGTAAATCCCTTCAATAGAGTCATCCTGCATCGTCAGCAAAA 948506 Query 111927 AGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAA 111986 |||| |||| |||||| | | |||||| | || || || ||||||| || || Sbjct 948505 AGCACGACGACAACTGCGGACGCGTTGTACCCGAGTTAAACAGCGTTGGTGAGGCATGCG 948446 Query 111987 TGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 112046 | |||| || |||||| ||| || ||||| | || || || || || ||||| | Sbjct 948445 TAAACAGCTTCTGCGACATCATGTTATACGTCTCAATAACCGACTCTATATCGTCCCCAT 948386 Query 112047 GGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||| || | || | ||| | || ||||||||| Sbjct 948385 GGATCCCAACGCTAACTCTCATAATCAAGTACTGTGG 948349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031434771200