Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq29 408 1e-108 seq14 215 2e-50 seq16 172 2e-37 seq56 170 6e-37 seq5 167 7e-36 seq33 122 3e-22 seq6 104 7e-17 seq3 102 2e-16 >seq29 Length=252028 Score = 408 bits (452), Expect = 1e-108 Identities = 1042/1562 (67%), Gaps = 39/1562 (2%) Strand=Plus/Minus Query 349189 GaaaaaaaCCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCA 349248 ||| |||| ||||| ||||| ||||| || || || || || ||||| | || ||||| Sbjct 108660 GAACAAAA--GCTATTGGAATAGATTTGGGAACAACATACTCATGTGTGGGAGTATGGCA 108603 Query 349249 AAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGT 349308 |||||| | ||||| |||||||||||||||||||||||| | ||||| ||||| || || Sbjct 108602 AAATGACAGAGTAGAGATAATTGCAAATGATCAAGGTAACCGTACAACACCATCGTATGT 108543 Query 349309 TGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAA 349368 |||||||| || |||| | || | || ||| | ||||| || || | || || Sbjct 108542 AGCATTTACAGATGATGAGAGATTGGTGGGAGATGCAGCAAAGAACCAGGTGGCAATGAA 108483 Query 349369 TCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAA 349426 |||| ||| || || ||||| | |||||| | ||||| | | ||| ||| || | Sbjct 108482 CCCAACAAACACAGTGTTTGACGTTAAGCGGTTGATTGGGCGTCGGTTTGATGAGGCAGA 108423 Query 349427 TCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAA 349486 | || ||| || | || || ||| | | | || || || | | || || || Sbjct 108422 GGTGCA--ATCAGACATGAAGCACTTTTCATACAAGGTGGTGTCAGAGG--GGGGA-AAG 108368 Query 349487 CCAATTATTGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTC 349545 ||||| |||| || || || || || ||||| ||| ||| || || || | || Sbjct 108367 CCAATGTGCCAGGTAGAGTACAAGGGAGAGACAAAGACA-TTTAGCCCAGAGGAGGTATC 108309 Query 349546 ATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAAC 349605 ||| ||| | || || |||||||| | || || |||| | | || | ||| | Sbjct 108308 ATCGATGATATTGACAAAGATGAAGGAGACAGCAGAGGCATTTATTGGAACAGAAGTGAA 108249 Query 349606 TGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGA 349665 ||||| ||| | || |||||||| || ||||| ||| | ||| | |||||||| || Sbjct 108248 GGATGCAGTTGTAACAGTACCAGCATACTTTAACGATTCGCAGAGACAAGCAACAAAGGA 108189 Query 349666 TGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGC 349725 ||| || ||||| || || || || || | || ||||| || || || || ||||| Sbjct 108188 TGCAGGGCTTATTGCAGGATTGAACGTGCTCCGTATTATTAACGAGCCAACAGCAGCAGC 108129 Query 349726 AATTGCATATGGGCTTGATAAAATG--AGTGACCAAGaaaaaaaTATTCTTATTTTTGAT 349783 || |||||||| || || || | | ||| |||| |||| ||||| ||| Sbjct 108128 GATAGCATATGGACTGGACAAGAAGGCAGTTGGAGAGAAGTTGGTATTGATATTT--GAT 108071 Query 349784 TTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTT 349843 || || || || || ||||| || || | || || ||||||| || ||||| || || Sbjct 108070 TTGGGAGGCGGAACATTTGACGTTTCGTTGCTGTCAATTGAAGACGGGATTTTCGAGGTC 108011 Query 349844 AAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG 349903 || |||| || || || |||||| | || |||||||| ||||| || | || || | Sbjct 108010 AAGTCAACAGCAGGAGACACACATTTGGGGGGAGAAGACTTTGACAACAGACTTGT---G 107954 Query 349904 CATTTTGTTA---AAGAATTTAAGCGTCAAGCTAAA-ATTGATATTGGAGATAATCCTAG 349959 | ||| | | |||| || ||||| |||| | || | || || | | || || || Sbjct 107953 AACTTTTTCAGTGAAGAGTTCAAGCG-CAAGTTCAAGAAGGACATGTCAAAGAACCCAAG 107895 Query 349960 AGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTAC 350019 |||| | ||||| | ||||| || |||||| | || |||||| | || ||| | || Sbjct 107894 AGCACTTCGTCGTTTGAGAACAGCATGTGAAAGAGCAAAGCGTACATTGTCAAGCGCAAC 107835 Query 350020 CCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTAC 350079 |||||| | ||||||| || | | ||| || | |||||||| | || || || Sbjct 107834 ACAAACCACAGTTGAAATCGACAGTTTGTTTGAAGGAACAGATTTCTACACTTCAATCAC 107775 Query 350080 ACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGA 350139 ||||||||| ||||||||| | | || | || ||| | || | || || || || Sbjct 107774 ACGTGCTCGTTTTGAAGAACTCAACAATGACTTGTTCAGATCTACTCTTGACCCAGTAGA 107715 Query 350140 AAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGA--TTGATGAAGTAGTTTTAGTT 350197 || || | | ||| || || || | | || ||| | | ||| | ||| | ||| Sbjct 107714 GAAGGTGCTCAGAGACGC-CAAGTG-CGACAAGTCACAAGTCAGCGAAATTGTTCTTGTT 107657 Query 350198 GGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAA 350257 ||||| || || ||||||||||| || || | | | ||||| || || || || ||| Sbjct 107656 GGTGGATCCACCCGTATTCCAAAGGTGCAGAAAATGATTTCTGACTTCTTCAACGGAAAA 107597 Query 350258 GAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 |||| | | || || || ||||| ||||| |||||||| ||||| || ||||||||||| Sbjct 107596 GAACTCGACAAG-TCCATCAATCCTGATGAGGCTGTTGCTTATGGAGCCGCTGTTCAGGC 107538 Query 350317 ATCTATTTTATCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGT 350373 | ||| | |||| | | | ||| || | | || || || || || ||||| Sbjct 107537 CGCCATTCTTACTGG---TGACACTTCCGAGAAGACCCAAGACCTTTTGCTTCTTGATGT 107481 Query 350374 AACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAG 350433 | || ||||| ||||| | || ||| |||||| || ||||||| || || | Sbjct 107480 TGCCCCGCTTTCTCTTGGCATTGAGACTGCTGGTGGTGTCATGACTGCCCTCATCAAGCG 107421 Query 350434 AAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCC 350493 || | ||||| ||| || |||||| | | || || || | || ||||| || || Sbjct 107420 CAACACCACTGTTCCTTGCAAGAAGTCCGAGATCTTCTCCACTTACGCCGATAACCAACC 107361 Query 350494 AGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACT 350553 || || || || || | ||||||||||||| | | || || || || || | || Sbjct 107360 AGGTGTCCTCATCCAGGTCTATGAAGGTGAACGTACAAGAACCAAGGACAACAACATGCT 107301 Query 350554 TGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGT 350613 ||| | || || | |||||| ||| ||| | || |||||||| | ||||| Sbjct 107300 TGGTAAGTTCGAACTCTCCGGAATTCCCCCAGCTCCTCGCGGTGTTCCTCAAGTCGAAGT 107241 Query 350614 CTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGG 350673 | | || || | ||| | |||||||| | || || | || ||||| || | | || Sbjct 107240 CACCTTTGACGTCGATGCCAATGGTATCCTCAACGTCTCTGCTGTTGACAAGACCACCGG 107181 Query 350674 TAAAAGT--AGTAAGGTAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATT 350731 ||||| | ||| | || ||||| |||||| | || || |||||||||||| Sbjct 107180 --AAAGTCAAACAAGATCACCATCACTAACGATAAAGGCCGTCTCTCCAAAGAAGATATT 107123 Query 350732 GA 350733 || Sbjct 107122 GA 107121 Score = 143 bits (158), Expect = 8e-29 Identities = 645/1012 (64%), Gaps = 20/1012 (2%) Strand=Plus/Plus Query 182789 TTCCTCATCTTCTTTAGCATACTTTTCAGCATCCATTG-TCATTCTTTCTATTTCATCTT 182847 ||||||||| || || ||||||||||| || |||| |||| | ||| || || |||| Sbjct 107075 TTCCTCATCATCCTTCTTGTACTTTTCAGCCTC-ATTGATCATGCGTTCAATATCTTCTT 107133 Query 182848 TAGAAAGATGACCTGCATCATTTGTAATTACTACATTACTAGTTACTCCAGTTGATTTTT 182907 | || ||| | ||| ||| || || || | || | | ||| || | || | Sbjct 107134 TGGAGAGACGGCCTTTATCGTTAGTGATGGTGATCTTGTTTGACTTTCCGGTGGTCTTGT 107193 Query 182908 CAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTG 182967 ||| || || || | |||||||| | || || ||||| | ||||| | || | Sbjct 107194 CAACAGCAGAGACGTTGAGGATACCATTGGCATCGACGTCAAAGGTGACTTCGACTTGAG 107253 Query 182968 GAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTA--AATTCACCTAATTTATTATT 183025 ||||||| || || ||| |||||||| | | ||| || | ||| | | || || Sbjct 107254 GAACACCGCGAGGAGCTGGGGGAATTCCGG--AGAGTTCGAACTTACCAAGCATGTTGTT 107311 Query 183026 ATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATC 183085 || || ||||||| | || |||||||| || || || || |||| || ||||| Sbjct 107312 GTCCTTGGTTCTTGTACGTTCACCTTCATAGACCTGGATGAGGACACCTGGTTGGTTATC 107371 Query 183086 ACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAAT 183145 ||||| || || | | || || ||||| ||| | || ||| | | Sbjct 107372 GGCGTAAGTGGAGAAGATCTCGGACTTCTTGCAAGGAACAGTGGTGTTGCGCTTGATGAG 107431 Query 183146 TACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAA 183205 ||||||| || | | ||||| || | || | || | || || ||||| || | Sbjct 107432 GGCAGTCATGACACCACCAGCAGTCTCAATGCCAAGAGAAAGCGGGGCAACATCAAGAAG 107491 Query 183206 TAATAAATCTGATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGC 183265 || | ||| || || || || | | || | | ||| || || |||||||| || Sbjct 107492 CAAAAGGTCTTGGGTCTTCTCGGAAGTGTCACCAGTAAGAATGGCGGCCTGAACAGCGGC 107551 Query 183266 ACCATATGCAACAGCTTCATCTGGGTTAATTGAA----CGAGATAATTCTTTGCCATTAA 183321 ||||| |||||||| ||||| || || || || |||| |||||| || || | Sbjct 107552 TCCATAAGCAACAGCCTCATCAGGATTGATGGACTTGTCGAG----TTCTTTTCCGTTGA 107607 Query 183322 AAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTA 183381 | || || |||| ||||| || | |||||||| | || || ||||| || | || | Sbjct 107608 AGAAGTCAGAAATCATTTTCTGCACCTTTGGAATACGGGTGGATCCACCAACAAGAACAA 107667 Query 183382 CTTCATCGA--TATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTC 183439 ||| || | | |||| | | || | | ||| | | || || || || ||||| Sbjct 107668 TTTCGCTGACTTGTGACTTGTCGCACTTGGCG--TCTCTGAGCACCTTCTCTACTGGGTC 107725 Query 183440 CATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGa 183499 | ||| ||| || || || | | ||||| || | || | || | || | Sbjct 107726 AAGAGTAGATCTGAACAAGTCATTGTTGAGTTCTTCAAAACGAGCACGTGTGATTGAAGT 107785 Query 183500 aaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGA 183559 | || || | || | | | || || ||||||| | |||||||| | ||| Sbjct 107786 GTAGAAATCTGTTCCTTCAAACAAACTGTCGATTTCAACTGTGGTTTGTGTTGCGCTTGA 107845 Query 183560 TAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATC 183619 ||||| | || |||| ||||||||||||||| | ||||| | || |||||| || | Sbjct 107846 CAATGTACGCTTTGCTCTTTCACATGCTGTTCTCAAACGACGAAGTGCTCTTGGGTTCTT 107905 Query 183620 TGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAAT-AAAATGTTGAAGTAATCTTG 183678 || || || | || || | || || || | | |||| ||| | | ||| Sbjct 107906 TGACATGTCCTTCTTGAACTTGCGCTTGAACTCTTCACTGAAAAAGTTCACA-AGTCTGT 107964 Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTC 183738 | ||||| ||||| || || |||||||| || || || || | || || || || || | Sbjct 107965 TGTCAAAGTCTTCTCCCCCCAAATGTGTGTCTCCTGCTGTTGACTTGACCTCGAAAATCC 108024 Query 183739 CGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 |||||||||| | | || || |||||||| || || ||||||||||| Sbjct 108025 CGTCTTCAATTGACAGCAACGAAACGTCAAATGTTCCGCCTCCCAAATCAAA 108076 >seq14 Length=408299 Score = 215 bits (238), Expect = 2e-50 Identities = 470/701 (67%), Gaps = 21/701 (3%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || |||||| | || || || || || |||||||| |||||| || ||| | Sbjct 321804 GCTATCGGTATCGATCTTGGAACAACATACTCATGTGTTGCAGTTTGGGAAGGTGAGAGA 321745 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 |||||||| ||||| ||||| ||||||||| | || || |||||||| ||||| || || Sbjct 321744 GTAGAAATCATTGCCAATGAGCAAGGTAACCGTACCACACCATCATATGTTGCTTTCACA 321685 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | |||||| || | || ||| | || || || || | || || ||| || Sbjct 321684 GATTCAGAGCGTTTGGTAGGAGATGCCGCCAAGAACCAGTCGGCAATGAACCCAGCCAAC 321625 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAA----TCTACACA 349434 || || ||||| | |||||| | |||||| | ||||| |||| || || | | Sbjct 321624 ACAGTATTTGACGTTAAGCGTTTGATTGGTCGTCGTTTTGATGACGAACACGTCAAGAAG 321565 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAAC---CAAT 349491 | | || || | || || | ||||| |||| | | || || | Sbjct 321564 GACAGTGCT----CACTGGCCATTCAAGGTTGT------AGACCGCAACGCACAGCCATT 321515 Query 349492 TATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAAT 349551 ||| |||||||| | || || | || |||| | ||| |||| || |||||||| Sbjct 321514 TATCCAGGTTGAAGTCAGTGGCGAGAAGAAGGAATTCTCACCACAAGAGATCTCATCAAT 321455 Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGC 349611 | |||| | || |||||||| | || ||||| | || || | || || | | || Sbjct 321454 GATTTTGATCAAGATGAAGGAGGTAGCAGAAGCCAAGTTGGGAAAGACCGTCAAGAAGGC 321395 Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671 || || || ||||||||||| |||| || |||||||| ||| || || ||||| || Sbjct 321394 CGTCATCACAGTACCAGCCTACTTTAGCGACTCCCAGCGTAATGCCACCAAGGATGCCGG 321335 Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731 | || | || | | ||||| | || || || || || || || ||||| ||||| Sbjct 321334 AACAATCTCAGGACTTGAGGTTCTGCGTATTATCAACGAGCCAACAGCCGCAGCTATTGC 321275 Query 349732 ATATGGGCTTGATAAAATGAG--TGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 ||||| | || | | ||| ||| |||| || || | ||||||||||| || Sbjct 321274 TTATGGTTTGGACACCAAGAGCACAACCGAGAAGCAA--GTTTTGATTTTTGATTTGGGA 321217 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||| ||||||||||| ||| | || || | || ||||| || ||| || ||| Sbjct 321216 GGTGGAACTTTTGATGTTTCATTGCTTTCAATCACAGGAGGAATCTTCTCAGTAAAGGCA 321157 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || || || || || ||| | || |||||||||||||| || Sbjct 321156 ACAGCCGGAGACACCCATTTGGGAGGAGAAGATTTTGACAA 321116 >seq16 Length=823159 Score = 172 bits (190), Expect = 2e-37 Identities = 182/237 (77%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | |||||| |||||||| ||||| || || | Sbjct 229135 TTTGCATACCACCACGAAGACGAAGTACCAAATGAAGGGTAGACTCCTTTTGGATGTTGT 229194 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || || || ||||| |||||||||||||||||||| || | |||||| || | Sbjct 229195 AGTCAGACAAGGTGCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGGT 229254 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGAT 140681 | || || || || || ||||||||||| ||| || || || || || || | || || Sbjct 229255 CTGGTGGGATCCCCTCCTTATCCTGAATCTTTTGC-TTGACGTTGTCGATTGTGTCTGAG 229313 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||||| ||||| |||| ||| || || || || ||||| ||||| ||||||||| Sbjct 229314 GACTCAACCTCAAGGGTAATTGTTTTACCAGTCAGCGTTTTGACAAAGATCTGCATT 229370 Score = 167 bits (184), Expect = 7e-36 Identities = 180/236 (76%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | |||||| |||||||| ||||| || || | Sbjct 228679 TTTGCATACCACCACGAAGACGAAGTACCAAATGAAGGGTAGACTCCTTTTGGATGTTGT 228738 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || || || ||||| |||||||||||||||||||| || | |||||| || | Sbjct 228739 AGTCAGACAAGGTGCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGGT 228798 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGAT 140681 | || || || || || ||||||||||| ||| || || || || || || | || || Sbjct 228799 CTGGTGGGATCCCCTCCTTATCCTGAATCTTTTGC-TTGACGTTGTCGATTGTGTCTGAG 228857 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| ||||| |||| ||| || || || || ||||| ||||| || ||||| Sbjct 228858 GACTCAACCTCAAGGGTAATTGTTTTACCAGTCAGCGTTTTAACAAAGATTTGCAT 228913 Score = 167 bits (184), Expect = 7e-36 Identities = 180/236 (76%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | |||||| |||||||| ||||| || || | Sbjct 228907 TTTGCATACCACCACGAAGACGAAGTACCAAATGAAGGGTAGACTCCTTTTGGATGTTGT 228966 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || || || ||||| |||||||||||||||||||| || | |||||| || | Sbjct 228967 AGTCAGACAAGGTGCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGGT 229026 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGAT 140681 | || || || || || ||||||||||| ||| || || || || || || | || || Sbjct 229027 CTGGTGGGATCCCCTCCTTATCCTGAATCTTTTGC-TTGACGTTGTCGATTGTGTCTGAG 229085 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| ||||| |||| ||| || || || || ||||| ||||| || ||||| Sbjct 229086 GACTCAACCTCAAGGGTAATTGTTTTACCAGTCAGCGTTTTAACAAAGATTTGCAT 229141 Score = 147 bits (162), Expect = 7e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | || || |||||||| ||||| || || || ||||| Sbjct 228459 CCACCACGAAGACGAAGTACCAAGTGCAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 228518 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 || || || ||||| |||||||||||||||||||| || | |||||| || || || || Sbjct 228519 AAGGTGCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGG 228578 Query 140631 ATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || ||||||||||| ||| || || || || || || | || || | ||||| Sbjct 228579 ATCCCCTCCTTATCCTGAATCTTTTGC-TTGACGTTGTCGATTGTGTCTGAGGACTCAAC 228637 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| |||| ||| || || || || ||||| ||||| || ||||| Sbjct 228638 CTCAAGGGTAATTGTTTTACCAGTCAGCGTTTTAACAAAGATTTGCAT 228685 Score = 84.2 bits (92), Expect = 7e-11 Identities = 163/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCA 223762 ||||| ||||| ||||| | ||||| | | || | ||||| || ||||| | ||| Sbjct 377087 GCAAAGTCTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTCCT 377146 Query 223763 GGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATA 223822 ||||| | ||||||||||| | ||| || ||||| ||| | ||||||||| || ||| Sbjct 377147 GGCATCAGCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAATA 377206 Query 223823 CCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATC 223882 || || || |||||||| | || || |||| || || | ||| | ||| Sbjct 377207 CCCTCAACTACTGCAAACGCCGCCAAACGCTCACCAAATGGTGCCTCATCGTCATCAATC 377266 Query 223883 CATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAAC 223942 || || | ||||| | ||| |||| ||| || | || || || | || |||||| Sbjct 377267 CACTTCAGGGCCCACTTTGCCTTTTCTCCAATGCACGGAATGTTGTCAATTGCGTTAAAC 377326 Query 223943 A 223943 | Sbjct 377327 A 377327 >seq56 Length=671324 Score = 170 bits (188), Expect = 6e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | |||||||| || || ||||| || || || || || Sbjct 567836 ACCACCACGGAGACGGAGTACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGA 567777 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || || || ||||| |||||||| || || ||||| || | |||||||||||| || || Sbjct 567776 CAAGGTACGGCCATCCTCAAGTTGCTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGG 567717 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||||||||| |||||||| || || ||| || ||||| || | ||| || | ||| || Sbjct 567716 AATTCCTTCCTTATCCTGGATCTTTTGTTTAACGTTATCGATGGTATCTGAAGATTCCAC 567657 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || | ||||| || |||||||| |||||||||||||||||| Sbjct 567656 CTCGAGGGTGATGGTCTTCCCAGTTAGTGTCTTTACAAAAATCTGCATT 567608 >seq5 Length=1009252 Score = 167 bits (184), Expect = 7e-36 Identities = 466/707 (66%), Gaps = 25/707 (4%) Strand=Plus/Plus Query 349195 aaCCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGA 349254 ||| | ||| || || ||||| || || || || || ||||||| |||| | |||| Sbjct 522886 AACAGTTATTGGTATTGATTTGGGAACAACATACTCCTGTGTTGGTGTTCACAAGAATGG 522945 Query 349255 TCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATT 349314 |||||||||||| ||||| || || ||||| ||| | | || |||||||| || || | Sbjct 522946 TCGTGTAGAAATTATTGCCAACGAGCAAGGAAACCGTATTACCCCATCATATGTAGCCTG 523005 Query 349315 TACC---GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCC 349371 ||| || | ||| | | |||| ||| | || || |||||||| || || || Sbjct 523006 GACCAAGGACAACGAGAGACTTGTTGGAGATGCAGCCAAGAATCAAGCCGCCAGCAACCC 523065 Query 349372 AAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTAC 349431 | |||| || | ||||| | ||||| | || || | | ||| |||||| | Sbjct 523066 AGAAAACACACTGTTTGACTCCAAGCGTTTGATCGGAATGAACTTTAATGACAAGGA-AG 523124 Query 349432 ACAATC-TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAA--CC 349488 || | ||| | || | | || ||| | || || | || | | || Sbjct 523125 TTAAGCGTGACATGAAGAACTGGCCATTTTCACTT-----AAGGGCAAGTCAAACCGTCC 523179 Query 349489 AATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATC 349548 | | |||| ||| | || | ||| | || ||| ||| |||||| ||||| | Sbjct 523180 AGTGTTTGAAGTTACAATCAATGACGAAAAGAAGACATTCACACCAGAAGAAGTTTCAGC 523239 Query 349549 AATGGTTTTAGTTAAA-ATGAAGGAAATTGCTGAAGCATATTTAGGTGAA----ACAGTA 349603 |||||| || || ||| ||||||||||| ||||| ||||| | |||| | |||| Sbjct 523240 AATGGTATT-GTCAAAGATGAAGGAAATCGCTGAGGCATACT----TGAACACCAAAGTA 523294 Query 349604 ACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAA 349663 || | || ||| | || ||||||||||| || |||||||| | || || ||| Sbjct 523295 ACACACGCCGTTGTAACAGTACCAGCCTACTTCTCAGATGCCCAAAGACAAGCCACCAAA 523354 Query 349664 GATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCA 349723 || || || |||| | || | || || || ||||| | |||||||| || || ||| Sbjct 523355 GACGCAGGAGCCATTTCAGGACTTAACGTGCTCAGAATTGTAAATGAACCAACAGCAGCA 523414 Query 349724 GCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGAT 349783 || ||||| || || | || || || || ||| | | | ||| | | | |||| Sbjct 523415 GCCATTGCTTACGGTTTGGACAA---GAAGGAAGGAGAGAGACACATTTTGGTATATGAT 523471 Query 349784 TTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTT 349843 | || ||||| |||||||||||||| || || | |||| || ||| | |||||||| Sbjct 523472 CTGGGAGGTGGAACTTTTGATGTATCGCTTCTCGCTATTGATGATGGAGTGTTTGAAGTA 523531 Query 349844 AAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || || | || ||||| ||| | || ||| ||||||||||||| Sbjct 523532 TTGGCCACATCCGGAGATACCCATTTGGGAGGACAAGATTTTGATAA 523578 >seq33 Length=522307 Score = 122 bits (134), Expect = 3e-22 Identities = 103/127 (81%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | ||||||||||| || || || || |||||||| || || ||||| Sbjct 111584 ACCACCACGAAGACGGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCAGA 111525 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| ||||||||||| |||||||| | |||||||||||| || || Sbjct 111524 AAGAGTACGTCCATCTTCGAGTTGTTTTCCTGCAAAGATCAAACGTTGCTGATCTGGTGG 111465 Query 140630 AATTCCT 140636 ||||||| Sbjct 111464 AATTCCT 111458 >seq6 Length=512426 Score = 104 bits (114), Expect = 7e-17 Identities = 226/337 (67%), Gaps = 6/337 (2%) Strand=Plus/Plus Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||| ||| || |||||||| | || || |||| ||| || | |||| | | || Sbjct 293175 GTTGTAGGAAAGATGAAGGAGACAGCAGAGGCATTTTTGGGAACACCAGTGAAGAACGCA 293234 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || ||||| |||||||| || ||||| ||| | ||| | |||||||| ||||| || Sbjct 293235 GTGATTACAGTACCAGCGTACTTTAACGATTCGCAGAGACAGGCAACAAAGGATGCGGGA 293294 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 ||| | || || ||||| || ||| |||| || || || || || ||||| ||||| Sbjct 293295 TCAATTTCAGGATTGAATGTGCTTAGAGTGATCAACGAGCCAACGGCAGCAGCGCTTGCA 293354 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || |||| || |||||| ||| | | | | | |||||| || || Sbjct 293355 TACGGAGTTGAGAAGGACAGTGAC-AAGGTAGTAGCAGTGTA-----TGATTTGGGAGGA 293408 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 || || |||||| | || | || | || ||||| | |||||||| || | || Sbjct 293409 GGAACATTTGATATTTCGATTCTGGAGATCCAAAAGGGAGTGTTTGAAGTAAAGTCGACA 293468 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 || || |||||| | || ||||||||||| |||| Sbjct 293469 CACGGAGACACACATTTGGGAGGAGAAGATTTCGATA 293505 >seq3 Length=595855 Score = 102 bits (112), Expect = 2e-16 Identities = 105/137 (77%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || ||||||||| | || || || ||| || | ||||| ||||||||||| || || Sbjct 330362 CGCGGCACACCAAGGGTTACGTT---TTTGGAGGACACACCTGCAAAGTGGAACGTGTTG 330306 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | |||||||| |||||||||||| ||||| || |||| | ||| |||||||| Sbjct 330305 AGCGTCATTTGAGTAGCGGGCTCACCAATAGACTGGGCAGCAAGAGTGCCGACCATTTCC 330246 Query 377578 CCAGGATTGACAATAGC 377594 |||||| |||| ||| Sbjct 330245 CCAGGAGCAACAAGAGC 330229 Score = 89.7 bits (98), Expect = 2e-12 Identities = 163/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || || ||||||| | |||||| || ||||| ||||| | ||| ||||||||||||| Sbjct 329564 ATGTACCCAGTTTCAGCAGTTTTGACGGCAGTGTCAATAAGACCCTCACGACCACCCATA 329505 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 || |||||| | ||||| || || || || | | | || |||| | ||| ||| Sbjct 329504 GCGTGGAAGTAGAATTCCTGGGGCGTGAGACCGCGCAGGTACGAGTTCTCGACAAAGCCT 329445 Query 378352 CTTGCGC-CTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCC 378410 | ||| | ||||| | || | || || | || || | || || || ||||| Sbjct 329444 C-TGCTCTGGGGCGAGTAGTCGTCCTTGGTGAAGTGGGGCAGCGTGCGGTTGCGGAACCC 329386 Query 378411 ATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAG 378466 | ||||||||||| | || ||||||||||| || |||| || | |||||||| Sbjct 329385 AAATGGAATTCGTCTACCCTCAACATTCTGCTGCCCAACAGCGGCGGTCATTTGAG 329330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253002177816