Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq16 136 3e-27 >seq16 Length=823159 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| ||||| || || | ||||| ||||| || || | || Sbjct 229369 ATGCAGATCTTTGTCAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCCTCA 229310 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||||| ||||| || || || || || ||||| || ||| Sbjct 229309 GACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGACCAA 229250 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || |||||| | || || | ||| | || || |||||| Sbjct 229249 CAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTACAAC 229190 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | |||||||| | ||| | || ||||| || Sbjct 229189 ATCCAAAAGGAGTCTACCCTTCATTTGGTACTTCGTCTTCGTGGTGGTAT 229140 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||| || || | ||||| ||||| || || | || Sbjct 228913 ATGCAAATCTTTGTTAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCCTCA 228854 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||||| ||||| || || || || || ||||| || ||| Sbjct 228853 GACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGACCAA 228794 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || |||||| | || || | ||| | || || |||||| Sbjct 228793 CAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTACAAC 228734 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | |||||||| | ||| | || ||||| || Sbjct 228733 ATCCAAAAGGAGTCTACCCTTCATTTGGTACTTCGTCTTCGTGGTGGTAT 228684 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||| || || | ||||| ||||| || || | || Sbjct 229141 ATGCAAATCTTTGTTAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCCTCA 229082 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||||| ||||| || || || || || ||||| || ||| Sbjct 229081 GACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGACCAA 229022 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || |||||| | || || | ||| | || || |||||| Sbjct 229021 CAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTACAAC 228962 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | |||||||| | ||| | || ||||| || Sbjct 228961 ATCCAAAAGGAGTCTACCCTTCATTTGGTACTTCGTCTTCGTGGTGGTAT 228912 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||| || || | ||||| ||||| || || | || Sbjct 228685 ATGCAAATCTTTGTTAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCCTCA 228626 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||||| ||||| || || || || || ||||| || ||| Sbjct 228625 GACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGACCAA 228566 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || |||||| | || || | ||| | || || |||||| Sbjct 228565 CAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTACAAC 228506 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| ||| | || ||||| | ||| | || ||||| Sbjct 228505 ATCCAAAAGGAGTCTACCCTGCACTTGGTACTTCGTCTTCGTGGTGG 228459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918008573440