Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq16 116 3e-21 seq56 107 1e-18 >seq16 Length=823159 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || ||||| || || || ||||| || || || || ||||| ||| Sbjct 229372 AAAATGCAGATCTTTGTCAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCC 229313 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || ||||| ||| || || || || | || ||||| Sbjct 229312 TCAGACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGAC 229253 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| ||||| || ||||| || |||||||| || || | ||||| || || ||| Sbjct 229252 CAACAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTAC 229193 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| ||||| ||||| || | ||||| || Sbjct 229192 AACATCCAAAAGGAGTCTACCCTTCATTTGGT 229161 >seq56 Length=671324 Score = 107 bits (118), Expect = 1e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 23606 TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACT 23665 ||| |||||||||||| || || || || || || || || ||||| ||||| || || | Sbjct 567604 TTAGAATGCAGATTTTTGTAAAGACACTAACTGGGAAGACCATCACCCTCGAGGTGGAAT 567663 Query 23666 CCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAG 23725 | | || || | || | | |||||||| || || || ||||| | || |||| Sbjct 567664 CTTCAGATACCATCGATAACGTTAAACAAAAGATCCAGGATAAGGAAGGAATTCCCCCAG 567723 Query 23726 ATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATT 23785 |||| || ||||| || |||||||| || ||||| || || | || || || ||| | Sbjct 567724 ATCAGCAACGTTTGATTTTTGCCGGTAAGCAACTTGAGGATGGCCGTACCTTGTCCGACT 567783 Query 23786 ACAACATACAAAAAGAGTCCAC 23807 ||||||| ||||| || ||||| Sbjct 567784 ACAACATCCAAAAGGAATCCAC 567805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009303396576