Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq16 183 3e-41 >seq16 Length=823159 Score = 183 bits (202), Expect = 3e-41 Identities = 580/892 (65%), Gaps = 8/892 (1%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| || ||||| ||||| || || |||||||| || || || ||||||| | Sbjct 376784 ACACCAGCCTTCTGGTAGTCGGAAACACGTTTTTCGAAAAAGTTGGTCTTGCCTTGCATT 376843 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 ||||| | |||||||| ||||| ||||| | |||||| ||||| | ||| Sbjct 376844 GAAATCATGTCCATAAAGTCAAATGGATTCTGCGAGTTGTAGTGTTTGGAGAATCCCAGA 376903 Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427 |||| |||| || || || ||||| || || || |||| ||| ||| | | ||| ||| Sbjct 376904 GCTATGAGCAGTCTATCGGCAACAAACTCAATGTATTGGCACATCAGTGCACTGTTCATT 376963 Query 4428 CCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCT 4487 || || | || || | || | |||||| |||| |||||| || || || || Sbjct 376964 CCGATCAGCGATACTGGCAACGACTCTGTCAAGAACTTTTGTTCAATGACAACAGCCTCA 377023 Query 4488 GTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAG-TATCCAAACAATAA 4546 | || | | | || | | ||| || || || || || | | || | | Sbjct 377024 AGCACAATGCCCCTGACCTTGGCCTCAGAAGGCTTGTTG-CTGAGATGGCTGAATAGCAG 377082 Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| ||||| || || || ||||| || | || ||| || || || || || || | Sbjct 377083 ACAGGCAAAGTCTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAG 377142 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 ||| ||||| | ||||||||||| ||||| || || || ||||| || || |||||||| Sbjct 377143 TCCTGGCATCAGCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAA 377202 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCT--TTGTCT 4724 || || || || | |||||||| | || || || || | || || | ||| Sbjct 377203 AATACCCTCAACTACTGCAAACGCCGCCAAACGCTCACCAAA--TGGTGCCTCATCGTCA 377260 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 | |||||| || | ||||| || || |||| || ||||||||| ||| || ||| Sbjct 377261 TCAATCCACTTCAGGGCCCACTTTGCCTTTTCTCCAATGCACGGAATGTTGTCAATTGCG 377320 Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844 ||||| | | | || || |||||||| || ||||| | || || ||| Sbjct 377321 TTAAACAGGTGGTTCTTCTCTGCCTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTAC 377380 Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTT 4904 ||||| || || || || || || || || || || || ||||| || |||| Sbjct 377381 ATTTCGCTGTGAATGTTCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGA 377440 Query 4905 ACTTGAACTTCGTTACAAAATCTTTCT-ACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 | || || || || | ||| || || || | |||||| || || || || || ||| Sbjct 377441 ATCTGTACCTCATTGCTAAA-GTTGCTCACCAGGTTTTCATTGACAATTCCATCCGAGGC 377499 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 ||||| || || | | | |||||||| | |||| ||| |||| ||| Sbjct 377500 AGCAAAGAATGCTAGGATGTTCTTGATAAAGTAACGCTCGTGTTCTGAAAGCTTTTCCCA 377559 Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTT 5083 ||| || | | | ||| || || ||| | |||| || ||||||||||| || Sbjct 377560 GTGTATTTTGTCATGTGAGAGATCCACCTCCTCAGCGTTCCAGAAAGACGCTTCCGCCTT 377619 Query 5084 TTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTG 5135 |||||||||| ||| | ||| | |||| || || | | ||||||||| Sbjct 377620 TTTGTACATATTCCACACCTCATGGTACTTGATTGGGAACAGCACAAATCTG 377671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049225263976