Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq16 214 2e-50 seq7 134 2e-26 >seq16 Length=823159 Score = 214 bits (236), Expect = 2e-50 Identities = 588/885 (66%), Gaps = 27/885 (3%) Strand=Plus/Plus Query 47865 ACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAAT 47924 |||||||| |||||||| || || ||||||| || ||| || | |||||||| |||||| Sbjct 376808 ACACGTTTTTCGAAAAAGTTGGTCTTGCCTTGCATTGAAATCATGTCCATAAAGTCAAAT 376867 Query 47925 GGATTAACTGCA--TTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAA 47982 ||||| |||| || || ||| ||||| | || | ||||||||| |||| Sbjct 376868 GGATT--CTGCGAGTTGTAGTGTTTGGAGAATCCCAGAGCTATGAGCAGTCTATCGGCAA 376925 Query 47983 CGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAG 48042 | || || || ||| ||||| | ||| |||||||| || || ||||| | | Sbjct 376926 CAAACTCAATGTATTGGCACATCAGTGCACTGTTCATTCCGATCAGCGATACTGGCAACG 376985 Query 48043 CCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATG----TTACC 48098 ||| || | |||| |||||| || |||| || || | | | | ||| | ||| Sbjct 376986 ACTCTGTCAAGAACTTTTGTTCAAT---GACAACAGCCTCAAGCA-CAATGCCCCTGACC 377041 Query 48099 GTTTCCTCACTTGG-TGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATG 48157 | ||||| || | | | | | ||| | || | | ||| ||||| || || Sbjct 377042 TTGGCCTCAGAAGGCTTGTTGCTG-AGATGGCTGAATAGCAGACAGGCAAAGTCTGTGTG 377100 Query 48158 AAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACG 48217 | |||||||| | | ||| | || || || ||||| || || ||||| || || | Sbjct 377101 TAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTCCTGGCATCAGCCCTCT 377160 Query 48218 TTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGC 48277 ||||||||||| || ||||| || || ||||| |||||||| || || || || | || Sbjct 377161 CTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAATACCCTCAACTACTGC 377220 Query 48278 AAATGCGGTAAGTCTCTCTCCGTAACTGG-----CTTCGTTGTGTATCCACCGTTGTGCC 48332 ||| || | | | ||| || || ||| | |||| | |||||| | ||| Sbjct 377221 AAACGCCGCCAAACGCTCACC--AAATGGTGCCTCATCGTCATCAATCCACTTCAGGGCC 377278 Query 48333 CAATCAGCCTTCTTCTTTACACAAGGCATTGTT-TCTATAGCATTAAAGAGAAAGttttt 48391 || | ||||| |||| | | | | |||| || || || ||||| || ||| || Sbjct 377279 CACTTTGCCTT-TTCTCCAATGCACGGAATGTTGTCAATTGCGTTAAACAGGTGGTTCTT 377337 Query 48392 ttCATTGCT-ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450 || | || ||||| || ||| || || | | || ||||||||| |||||| | Sbjct 377338 CTC-TGCCTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTACATTTCGCTGTGAATGT 377396 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTAC 48510 | ||||| || || || || || |||||||| || |||| ||||||||||| | | Sbjct 377397 TCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATCTGTACCTCATTGC 377456 Query 48511 AAAA-TCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAAT 48569 ||| | | ||| ||| || ||||| || |||||||| |||||||| ||||||| Sbjct 377457 TAAAGTTGCTCA-CCAGGTTTTCATTGACAATTCCATCCGAGGCAGCAAAGAATGCTAGG 377515 Query 48570 ACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTT 48629 | | || ||||| || |||| | || || | ||||| | | || | | Sbjct 377516 ATGTTCTTGATAAAGTAACGCTCGTGTTCTGAAAGCTTTTCCCAGTGTATTTTGTCATGT 377575 Query 48630 GATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCAT 48689 || | ||| || || ||||| |||| || || || || || ||||| ||||||||||| Sbjct 377576 GAGAGATCCACCTCCTCAGCGTTCCAGAAAGACGCTTCCGCCTTTTTGTACATATTCCAC 377635 Query 48690 ATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTT 48734 | ||| ||| | ||||||||| | |||||||| |||| ||| Sbjct 377636 ACCTCATGGTACTTGATTGGGAACAGCACAAATCTGCTTGGGTTT 377680 >seq7 Length=1083452 Score = 134 bits (148), Expect = 2e-26 Identities = 585/908 (64%), Gaps = 27/908 (3%) Strand=Plus/Minus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 ||||| ||||| | ||| | ||||| || ||||| || || ||||| ||| | Sbjct 949148 ATCTCTGTACACAAATTGGAGCTCTTGATTGTACCCAGGTTCTGCTGGTTTGACTTGCCA 949089 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852 ||||| | || || || || || |||| || || ||||||||||| || || | ||| Sbjct 949088 TTGCACGCATCTTTGTACAGCATGTACGGTGTTCCTGTTTCAATCTGCGAGTCCAGAATC 949029 Query 77853 GATTTCCAGA-CGACTCTAGCTTTTATCATAGAT-TTGT-ATCGCCTCTCTCTT-TCATA 77908 | | ||| | | || | ||| | | | | ||| | | ||||| | || || || Sbjct 949028 GCGTACCACAGCTGCTGT-GCTGGAACCTTCTTTCTTGCCAGCCCCTCTGTGTTCTCGTA 948970 Query 77909 --TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA-ATCCAGGGCATTC 77965 ||| ||| | ||| ||||| || ||||||||||| || | | || | || | | Sbjct 948969 CTTTGTGTACAATGCC--TCAAACTCCTCTCCCCAAACCTCGTGTAGATTTGGCGCCT-C 948913 Query 77966 ATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGG 78025 | |||||| | ||| |||||| | || ||| || || |||||||| | ||| || Sbjct 948912 GTGTGGGCAGAACAAACTCCAGTCCCTATTGTCCAGCACCCGCTTCATAAACAAATCCGG 948853 Query 78026 TATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT 78085 ||||| | || ||| | || || | || | || || ||||| ||||| Sbjct 948852 AATCCACATTCCATAAAACAAGTCACGTGCCCTGTTCTCCTCCTTTCCGTGGTTCTTGCG 948793 Query 78086 AAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCC 78145 | | | |||||| | || || | |||||||| || || ||||| || | | || Sbjct 948792 CAAACTCAAAAACTCAAAGATGTCCGCGTGCCATGGCTCCAGGTATATCGCAAATGCCCC 948733 Query 78146 AGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACAT 78205 || | ||||| ||||| || || | ||| || || || | || | |||| | ||| Sbjct 948732 TGGCCTCTTATTTCCTCCTTGGTCCACATACCTTGCTGTATGGTTGAATACTCGGAGCAT 948673 Query 78206 TGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT 78265 ||| | || || || ||||| || || ||||| | || || | |||| | || Sbjct 948672 TGGCACTATCCCATTCGATGTCCCGTTCGTTCCTGCTATGTACGAGTCTGTTGCCCTGAT 948613 Query 78266 ATTACTAATGGATA-TC---CCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTT 78321 ||| || | | || || ||||||||||| ||| ||||| | || || | | Sbjct 948612 GTTA----TGCACACTCAGACCAATTCCTCCTGCTGACTTTGATATCATCGCACATTGCT 948557 Query 78322 TCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAG 78381 ||| ||||||||| || || || ||| ||||||| ||| | || | ||| || | Sbjct 948556 TCAGTGTATCGTAAATCCCTTCAATAGAGTCATCCTGCATCGTCAGCAAAAAGCACGACG 948497 Query 78382 ACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATT 78441 ||| || || | || || | ||||| | || || || |||||||||||| | Sbjct 948496 ACAACTGCGGACGCGTTGTACCCGAGTTAAACAGCGTTGGTGAGGCATGCGTAAACAGCT 948437 Query 78442 TTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTAT---GTCCCATTGATGAATTC 78498 | | || | | || || || |||||| | || ||||| ||||| || || || Sbjct 948436 TCTGCGACATCATGTTATACGTCTCAATAACCGACTCTATATCGTCCCCATG--GA--TC 948381 Query 78499 CTACCGCT-ACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557 | | |||| || | ||| | || | ||| || || || | | ||| | ||| || Sbjct 948380 CCAACGCTAACTCTCATAATCAAGTACTGTGGCCTCTCCGCTGGCTTCCCGTCTATCCTC 948321 Query 78558 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCG 78617 |||||||| || | |||| || || || ||||| || |||||| ||| |||||||| Sbjct 948320 AACAAGTACGACCTCTCCAGTGTCTTGAATCCAAAGTAATTGTATCCAAAATCTCTCTCA 948261 Query 78618 TAAATAAT 78625 | || ||| Sbjct 948260 TCAACAAT 948253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668174798080