Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq16 165 8e-36 >seq16 Length=823159 Score = 165 bits (182), Expect = 8e-36 Identities = 487/746 (65%), Gaps = 20/746 (3%) Strand=Plus/Plus Query 23204 TCATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCT 23263 |||| ||||| || || || || ||||||| |||||||||| || ||||| || | Sbjct 376779 TCATGACACCAGCCTTCTGGTAGTCGGAAACACGTTTTTCGAAAAAGTTGGTCTTGCCTT 376838 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATT-----AGAAGTATTATATACAGCTTT 23318 | ||| || | |||||||| ||||||||||| || ||| | | | || | Sbjct 376839 GCATTGAAATCATGTCCATAAAGTCAAATGGATTCTGCGAGTTGTAGTGTTTGGAGAATC 376898 Query 23319 ACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATC 23378 || || | | | || ||||| || ||||| ||||| ||||| ||||||| | Sbjct 376899 CCA-GAG----CTATGAGCAGTCTATCGGCAACAAACTCAATGTATTGGCACATCAGTGC 376953 Query 23379 ATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGA 23438 | ||| || || || || |||||| | || || ||||| || ||||||| Sbjct 376954 ACTGTTCATTCCGATCAGCGATACTGGCAACGACTCTGTCAAGAACTTTTGTTCAATGAC 377013 Query 23439 AACAGCATCTTTAATTATTTGAACAATAACTT--CTTCACTAGGTGGATATTTTAAATAC 23496 |||||| || | || | | | ||| | ||| ||| | | | || Sbjct 377014 AACAGCCTCAAGCACAAT--GCCCCTGACCTTGGCCTCAGAAGGCTTGTTGCTGAGATGG 377071 Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 | || | | ||| ||||| || |||| |||||||| | | ||| | ||||| Sbjct 377072 CTGAATAGCAGACAGGCAAAGTCTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTG 377131 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 || ||||| | ||||||||| | |||| ||||| | ||| || ||||| ||||| ||| Sbjct 377132 GAGAATGTAAGTCCTGGCATCAGCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGAT 377191 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 || |||||||||||||||||||| | ||||| ||| | | ||| |||||||| ||| Sbjct 377192 CCTGAAAAGAAAATACCCTCAACTACTGCAAACGCCGCCAAACGCTCACCAAATGGTGCC 377251 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACA---CACTCAATT 23733 | || ||| |||||| || | ||| || ||||| || | || ||| ||| Sbjct 377252 TCATCGTCATCAATCCACTTCAGGGCCCACTTTGCCTT---TTCTCCAATGCACGGAATG 377308 Query 23734 GTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATT 23793 | |||||||| || || || | || ||| | | |||| || ||||| || | Sbjct 377309 TTGTCAATTGCGTTAAACAGGTGGTTCTTCTCTGCCTCATCTTGAATGTATGTGTCCAGC 377368 Query 23794 AGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACAT 23853 || | |||||||| ||||| || ||||| || || |||||||| |||||| Sbjct 377369 AGCAGTGAGTACATTTCGCTGTGAATGTTCTCAATCATGATTTGGAACCCATAGAAACAT 377428 Query 23854 CTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATA 23913 || || || | | || || ||||| ||| | | | | ||||| || ||||| Sbjct 377429 CTTGCCTCTGGAATCTGTACCTCATTGCTAAAGTTGCTCACCAGGTTTTCATTGACAATT 377488 Query 23914 CCATCACTAGCAGCAAAGAAAGCAAG 23939 ||||| ||||||||||| || || Sbjct 377489 CCATCCGAGGCAGCAAAGAATGCTAG 377514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487530660800