Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choanephora_20cucurbitarum_20[genbank_20GCA_5F001683725.1_202016-07- 12] 2,814 sequences; 29,096,908 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq2579 82.4 4e-11 >seq2579 Length=11567 Score = 82.4 bits (90), Expect = 4e-11 Identities = 68/81 (84%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGA-TCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| ||| || | ||| | ||| |||||||| |||||| ||||||||||||| | Sbjct 11322 AAAAAATAAAAATG-CTCATTACAGGGGTCGAACCTGTGACCTTGGCGTTATTAGCACCA 11380 Query 11503 CGCTCTRACCAACTGAGCTAA 11523 |||||| |||||||||||||| Sbjct 11381 CGCTCTAACCAACTGAGCTAA 11401 Lambda K H 0.640 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261482231995864