Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choanephora_20cucurbitarum_20[genbank_20GCA_5F001683725.1_202016-07- 12] 2,814 sequences; 29,096,908 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq131 86.0 2e-11 >seq131 Length=5186 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 188777 TTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATG 188836 |||| || ||||| || || ||||| | || ||| |||||| || | || | || | Sbjct 3728 TTGGTCCAACTGGATCGGGCAAAACCCTGTTGGCTAGAACATTAGCACAAATCCTCCAAG 3669 Query 188837 TACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATG 188896 ||||| | |||| |||||||| || |||| ||| | |||||||||||||| ||||||| Sbjct 3668 TACCTTTTTCTATGTCTGATGCCACACCTTTTACACAGGCTGGTTATGTAGGCGAAGATG 3609 Query 188897 TGGAA 188901 | ||| Sbjct 3608 TTGAA 3604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591853004665472