Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choanephora_20cucurbitarum_20[genbank_20GCA_5F001683725.1_202016-07- 12] 2,814 sequences; 29,096,908 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2232 91.5 1e-13 >seq2232 Length=20840 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | | || |||| |||| ||||||||| || || Sbjct 550 CTCCTTCTGGATGTTGTAGTCAGAGAGAGAACGGCCGTCTTCCAACTGCTTACCAGCGAA 609 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || || ||||| | ||| | || |||||||| |||||||||||| | | | Sbjct 610 AATGAGACGTTGTTGGTCTGGAGGRATGCCTTCCTTGTCTTGGATCTTTTGCTTTACATT 669 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | | || ||||| ||||| | ||||| ||||| || || | ||| || || Sbjct 670 TTCGATAGAATCAGATGATTCAACCTCTAAGGTGATGGTTTTGCCAGTAAGAGTCTTGAC 729 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 730 AAAGATTTGCAT 741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450777743335120