Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq33 105 7e-18 >seq33 Length=455653 Score = 105 bits (116), Expect = 7e-18 Identities = 223/330 (68%), Gaps = 2/330 (1%) Strand=Plus/Plus Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 ||||| |||||||| || ||||||||||| | | | ||||||| || || || || Sbjct 390915 TCCGCAACAAATTCAATGTATTGGCACATGAGCTTGGAGTTCATGCCAATGAGCGCGACA 390974 Query 16859 GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC- 16917 || || || || |||| ||| |||||| || || || || | || ||| | || Sbjct 390975 GGCAGCGCGTCGGTCAGGAATTCTTGCTCAATCTTGACGGCCTCGGTGATGATA-TCGCG 391033 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || || || | ||| || || | ||||| ||| | ||| || || || || Sbjct 391034 CACACGGTCATTGGAAGGCGTGTTGCGCAGATGGCCAAAGAGCAGGCACGCAAAGTCCGT 391093 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 || || |||||||| | || || || ||||| || || ||||| || |||||| || Sbjct 391094 GTGCAAACCCTCGTCACGGCAAATCAGCTCGTTGGAGAACGTCAAGCCAGGCATCAAGCC 391153 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 || ||||| | |||||| || | || |||| ||||| ||||| || ||||| || | Sbjct 391154 GCGCTTCTTGAGCCAAAAGATGGACGCAAACGCACCAGAGAAGAAAATGCCCTCAACCGC 391213 Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGT 17127 ||||| || | | || ||||| |||| Sbjct 391214 CGCAAAAGCAACAAGGCGCTCGGCAAACGT 391243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544636071320