Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq33 138 2e-27 >seq33 Length=455653 Score = 138 bits (152), Expect = 2e-27 Identities = 298/445 (67%), Gaps = 3/445 (1%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 ||||||| ||||| || ||||| || || ||||| |||||| || || ||||| || | Sbjct 391227 TTGTTGCTTTTGCGGCGGTTGAGGGCATTTTCTTCTCTGGTGCGTTTGCGTCCATCTTTT 391168 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || | ||||||| | || | |||||| ||| | |||| | | Sbjct 391167 GGCTCAAGAAGCGCGGCTTGATGCCTGGCTTGACGTTCTCCAACGAGCTGATTTGCCGTG 391108 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 |||| ||| | || |||||||| ||| |||| || | | | | || | Sbjct 391107 ACGAGGGTTTGCACACGGACTTTGCGTGCCTGCTCTTTGGCCA---TCTGCGCAACACGC 391051 Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155 | || | || | | | || || |||| || |||||| ||||| |||||||| | Sbjct 391050 CTTCCAATGACCGTGTGCGCGATATCATCACCGAGGCCGTCAAGATTGAGCAAGAATTCC 390991 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215 | || | | |||||||| | | || ||||||| |||| | ||| |||| |||| Sbjct 390990 TGACCGACGCGCTGCCTGTCGCGCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACA 390931 Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTA 102275 |||||||||| || || || | |||| | || | || |||||||| || | | Sbjct 390930 TTGAATTTGTTGCGGACCGCCTGCTCGTTGCTCTTGGCCAGGACAAGCACTACAAGGCAA 390871 Query 102276 CCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAA 102335 |||| ||||| || |||||| || || ||| || |||||||| || ||||| | Sbjct 390870 CCAATCCCTTTGACTTTATGGACCTCATCTCGCTCCAGGGCAAGACCAATTTCTTTGAGA 390811 Query 102336 AGAGAGTCGCCGAGTATCAACGTGC 102360 || | ||| | || || || ||||| Sbjct 390810 AGCGTGTCTCTGACTACCAGCGTGC 390786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582110822295