Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq61 104 3e-17 >seq61 Length=186913 Score = 104 bits (114), Expect = 3e-17 Identities = 338/525 (64%), Gaps = 0/525 (0%) Strand=Plus/Plus Query 63378 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63437 ||||| || || | ||| ||||| | | || || || ||||| ||||| || || | | Sbjct 184646 TGCCAAGGCTCGAGGTACATGGCAAACGCACCCGGGCGCTTGTTCCCTCCTTGGTCAACG 184705 Query 63438 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63497 || | || ||||| || | || | || ||| || | | ||| || | | |||||| Sbjct 184706 TAGCGCGCCGTGTTGTTGAACACGCGCAGCATAGGCAACAGACCATTGGCCGTGCCATTG 184765 Query 63498 GTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63557 || |||| || || || |||| || || || || | || || || || Sbjct 184766 GTGCCGGCAATGTACGAGCCCGTGGCGCGGATGTTGTGGATGTTCAAGCCAATGCCGCCG 184825 Query 63558 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCA 63617 ||| | || |||||| || || | || | ||| || |||||||| || || || Sbjct 184826 GCCGTCTTGGAGATTTGCGCACAGCACTTGAGCGTCTCGTAGATGCCCTCAATCGAGTCC 184885 Query 63618 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAAT 63677 || |||| | || | || || |||||||| | |||| || || ||||| || Sbjct 184886 TCCTTCATAGTCAGCAAGAAGCACGACGACATTTGCGGGCGAGGCGTGCCGGCATTGAAC 184945 Query 63678 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63737 || || || |||||||| || || || || | || | ||||||||| | ||| Sbjct 184946 AACGTCGGGCTCGCGTGCGTGAAGAATCGCTCCGACATGAGCTGGTACGTCTCCAAAGCG 185005 Query 63738 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63797 | || || || ||| || || || || |||||||| | || ||||| || | Sbjct 185006 GCATCAATGTCTTCGCCATGGATACCAACAGCCACACGCATGATCAAATGCTGCGGACGC 185065 Query 63798 TCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63857 || | | ||| || || || | ||| || || || | || || ||||||||| Sbjct 185066 TCCGCCACCTTGCCATTGATCTTGAGCAAATATGAACGCTCGAGCGTCTTGAAACCAAAA 185125 Query 63858 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 |||||||| |||||| || || || || || ||||||||||| Sbjct 185126 TAGTTGTAGCCAAAGTCACGATCATAGATGATCGCCGAATTGAGC 185170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816426964720