Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq61 116 5e-21 seq33 111 2e-19 >seq61 Length=186913 Score = 116 bits (128), Expect = 5e-21 Identities = 340/524 (65%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 ||||| || || | ||| ||||| | | || || || ||||| ||||| || || | | Sbjct 184646 TGCCAAGGCTCGAGGTACATGGCAAACGCACCCGGGCGCTTGTTCCCTCCTTGGTCAACG 184705 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 || | || ||||| || | || | || ||| || | | |||||||| || |||||| Sbjct 184706 TAGCGCGCCGTGTTGTTGAACACGCGCAGCATAGGCAACAGACCATTGGCCGTGCCATTG 184765 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCT 66350 || |||| || || || | || || || || || | || || || || Sbjct 184766 GTGCCGGCAATGTACGAGCCCGTGGCGCGGATGTTGTGGATGTTCAAGCCAATGCCGCCG 184825 Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410 ||| | || |||||| || || | || | ||| || ||||||||||| || || Sbjct 184826 GCCGTCTTGGAGATTTGCGCACAGCACTTGAGCGTCTCGTAGATGCCCTCAATCGAGTCC 184885 Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470 ||| |||| | || | || || |||||||| | ||| || || ||||| || Sbjct 184886 TCCTTCATAGTCAGCAAGAAGCACGACGACATTTGCGGGCGAGGCGTGCCGGCATTGAAC 184945 Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530 || || || |||||||| || || || || | || | ||||||||| | ||| Sbjct 184946 AACGTCGGGCTCGCGTGCGTGAAGAATCGCTCCGACATGAGCTGGTACGTCTCCAAAGCG 185005 Query 66531 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 66590 | || || || ||| || || || || |||||||| | || ||||| || | Sbjct 185006 GCATCAATGTCTTCGCCATGGATACCAACAGCCACACGCATGATCAAATGCTGCGGACGC 185065 Query 66591 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 66650 || | | |||| || || || | ||| || || || | || || ||||||||| Sbjct 185066 TCCGCCACCTTGCCATTGATCTTGAGCAAATATGAACGCTCGAGCGTCTTGAAACCAAAA 185125 Query 66651 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 |||||||| |||||| || || || || || |||| ||||| Sbjct 185126 TAGTTGTAGCCAAAGTCACGATCATAGATGATCGCCGAATTGAG 185169 >seq33 Length=455653 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231 ||| | ||||||||| | | ||| | |||||||| ||||| | || ||||| | ||| Sbjct 391094 GTGCAAACCCTCGTCACGGCAAATCAGCTCGTTGGAGAACGTCAAGCCAGGCATCAAGCC 391153 Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291 ||||| || |||||||| ||||||||||| | ||||| |||||||| || || || || Sbjct 391154 GCGCTTCTTGAGCCAAAAGATGGACGCAAACGCACCAGAGAAGAAAATGCCCTCAACCGC 391213 Query 36292 CGCAAAGGCAATAAGTCTCTC 36312 |||||| |||| ||| | ||| Sbjct 391214 CGCAAAAGCAACAAGGCGCTC 391234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171574153160