Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq61 131 2e-25 seq33 114 2e-20 >seq61 Length=186913 Score = 131 bits (144), Expect = 2e-25 Identities = 574/906 (63%), Gaps = 2/906 (0%) Strand=Plus/Plus Query 79669 ATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 79728 || || ||||| | || || || || ||||| || | || || || || || | Sbjct 184265 ATCTCCGTGCACAAATTGCTGCATTTGATGGTGCCGAGGTTCTGCTGGTTGGATTTGCGG 184324 Query 79729 TTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATC 79788 || ||||| ||||| || | ||||||||| | || || || |||| | || | |||| Sbjct 184325 TTGCACGCGTCCTTGTACAAGATGAACGGATTGCCCGTCTCGGTCTGGGCCTCGAGAATC 184384 Query 79789 GCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGTATTG 79847 || | ||| | | | ||||| || | | | | | | | || ||||||| | Sbjct 184385 GCGTACCACAACTTTTGCGCCTTGATCGTCTGGCGCGCACGGCCCTCCT-TTTCGTACTT 184443 Query 79848 TGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGG 79907 | | | || ||||| || || ||||| || |||| || || |||| || Sbjct 184444 TTCAAACAAGGCCTCGAATTCATCGCCCCACACCTCGTGCAAATTGGGCGCCTCGTTGGG 184503 Query 79908 ACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCA 79967 || | | |||||| || |||| ||| || || ||||| || | |||||| | ||| Sbjct 184504 GCAAAAGAGCGACCAGTCGCCATTGGCCTCGACACGCTTCATGAACAAATCAGGCACCCA 184563 Query 79968 AAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 80027 || || ||| | ||| | | | ||| || || || ||||| | || Sbjct 184564 GAGCGCGTAAAACAAATCGCGCGCGCGGATCTCGTCCTTGCCCACGTTCTTGCGCAATTC 184623 Query 80028 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCG 80087 | || | | ||| || | ||||| || || | ||| ||||| | | ||||| || Sbjct 184624 CAAAAAGGTGAAAATGTCGGCGTGCCAAGGCTCGAGGTACATGGCAAACGCACCCGGGCG 184683 Query 80088 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 80147 ||||| ||||| || || | ||| | || ||||| || | || | || ||| || | Sbjct 184684 CTTGTTCCCTCCTTGGTCAACGTAGCGCGCCGTGTTGTTGAACACGCGCAGCATAGGCAA 184743 Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACT 80207 | |||||||| || |||||||| |||| || || || |||| || || || Sbjct 184744 CAGACCATTGGCCGTGCCATTGGTGCCGGCAATGTACGAGCCCGTGGCGCGGATGTTGTG 184803 Query 80208 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 80267 || | || || || || ||| | || |||||| || || | || | ||| || Sbjct 184804 GATGTTCAAGCCAATGCCGCCGGCCGTCTTGGAGATTTGCGCACAGCACTTGAGCGTCTC 184863 Query 80268 ATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 80327 ||||||||||| || || || |||| | || | || || |||||||| | Sbjct 184864 GTAGATGCCCTCAATCGAGTCCTCCTTCATAGTCAGCAAGAAGCACGACGACATTTGCGG 184923 Query 80328 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAG 80387 ||| || || ||||| || || || || |||||||| || || || |||| Sbjct 184924 GCGAGGCGTGCCGGCATTGAACAACGTCGGGCTCGCGTGCGTGAAGAATCGCTCCGACAT 184983 Query 80388 TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACG 80447 || | ||||||||| | ||| | || || || ||| || || || || ||||| Sbjct 184984 GAGCTGGTACGTCTCCAAAGCGGCATCAATGTCTTCGCCATGGATACCAACAGCCACACG 185043 Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTT 80507 ||| | || ||||| || | || | | |||| ||| || || | ||| || || Sbjct 185044 CATGATCAAATGCTGCGGACGCTCCGCCACCTTGCCATTGATCTTGAGCAAATATGAACG 185103 Query 80508 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 80567 || | || || ||||||||||||||||| |||||| || || || || || |||| Sbjct 185104 CTCGAGCGTCTTGAAACCAAAATAGTTGTAGCCAAAGTCACGATCATAGATGATCGCCGA 185163 Query 80568 GTTGAG 80573 ||||| Sbjct 185164 ATTGAG 185169 >seq33 Length=455653 Score = 114 bits (126), Expect = 2e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||||| ||||||||| | | ||| || |||||||| ||||| | || ||||| | ||| Sbjct 391094 GTGCAAACCCTCGTCACGGCAAATCAGCTCGTTGGAGAACGTCAAGCCAGGCATCAAGCC 391153 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 ||||| || |||||||| ||||||||||| | ||||| ||||| || || || || || Sbjct 391154 GCGCTTCTTGAGCCAAAAGATGGACGCAAACGCACCAGAGAAGAAAATGCCCTCAACCGC 391213 Query 50094 GGCAAAGGCAACAAGTCTCTC 50114 ||||| |||||||| | ||| Sbjct 391214 CGCAAAAGCAACAAGGCGCTC 391234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267462224360