Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 208 1e-49 seq11 203 5e-48 >seq5 Length=887111 Score = 208 bits (230), Expect = 1e-49 Identities = 207/267 (78%), Gaps = 1/267 (0%) Strand=Plus/Plus Query 16437 AGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 |||||||||||| ||| ||| || || ||||| ||||| || |||||||| || |||||| Sbjct 3650 AGCGTCATCGCAAGATTTCTCCGTGACAACATTCAAGGCATTACCAAGCCTGCCATCCGT 3709 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||| ||||| |||||||| ||||||||| ||||||| | ||||||| |||| ||| Sbjct 3710 CGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGGCCTCATCTATGAGGAGACCCGT 3769 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| |||||| |||||||| ||| ||| |||| ||| || || ||| || |||||| Sbjct 3770 GGTGTCTTGAAGGTCTTCCTCGAGAACGTCATCCGTGACGCCGTCACCTACACTGAGCAC 3829 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 || || || ||||| |||||||| |||| ||||||| || | || || |||||||| Sbjct 3830 GCCAAGCGCAAGACCGTCACCTCGCTGGACGTCGTCTACGCCCTCAAGCGCCAAGGCCGC 3889 Query 16676 AAGATTTATGGTTTTGGAAGTTAATCT 16702 | | || || || || ||||| || Sbjct 3890 ACTCTGTACGGCTTCGGCGGTTAAGCT 3916 >seq11 Length=680710 Score = 203 bits (224), Expect = 5e-48 Identities = 205/264 (78%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 16437 AGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||||||||||| |||| |||||| || ||||||||||| || |||||||| ||||| ||| Sbjct 374164 AGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAAGGCATTACCAAGCCTGCTATTCGT 374222 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||| ||||| |||||||| ||||||||| ||||||| | |||| || |||| ||| Sbjct 374223 CGTCTTGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGT 374282 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| |||||| |||| | | | ||| || | ||| || || ||| || |||||| Sbjct 374283 GGTGTCTTGAAGGTCTTTTTGGAAAACGTCATTCGTGACGCCGTCACCTACACTGAGCAC 374342 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 || || || ||||| |||||||| |||| |||||||||| | || || ||||||||| Sbjct 374343 GCCAAGCGCAAGACCGTCACCTCTTTGGACGTCGTCTATGCTCTCAAGCGCCAAGGCCGT 374402 Query 16676 AAGATTTATGGTTTTGGAAGTTAA 16699 | | |||||||| || ||||| Sbjct 374403 ACCCTCTATGGTTTCGGCGGTTAA 374426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075063768257