Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq61 98.7 1e-15 >seq61 Length=186913 Score = 98.7 bits (108), Expect = 1e-15 Identities = 336/524 (64%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 63327 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63386 ||||| || || | ||| ||||| | | || || || ||||| ||||| || || | | Sbjct 184646 TGCCAAGGCTCGAGGTACATGGCAAACGCACCCGGGCGCTTGTTCCCTCCTTGGTCAACG 184705 Query 63387 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63446 || | || ||||| || | || | || ||| || | | ||| || | | |||||| Sbjct 184706 TAGCGCGCCGTGTTGTTGAACACGCGCAGCATAGGCAACAGACCATTGGCCGTGCCATTG 184765 Query 63447 GTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63506 || |||| || || || |||| || || || || | || || || || Sbjct 184766 GTGCCGGCAATGTACGAGCCCGTGGCGCGGATGTTGTGGATGTTCAAGCCAATGCCGCCG 184825 Query 63507 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCA 63566 ||| | || |||||| || || | || | ||| || ||||| ||||| || || Sbjct 184826 GCCGTCTTGGAGATTTGCGCACAGCACTTGAGCGTCTCGTAGATGCCCTCAATCGAGTCC 184885 Query 63567 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 63626 || |||| | || | || || |||||||| | ||| || || ||||| || Sbjct 184886 TCCTTCATAGTCAGCAAGAAGCACGACGACATTTGCGGGCGAGGCGTGCCGGCATTGAAC 184945 Query 63627 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63686 || || || |||||||| || || || || | || | ||||||||| | ||| Sbjct 184946 AACGTCGGGCTCGCGTGCGTGAAGAATCGCTCCGACATGAGCTGGTACGTCTCCAAAGCG 185005 Query 63687 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63746 | || || || ||| || || || || |||||||| | || ||||| || | Sbjct 185006 GCATCAATGTCTTCGCCATGGATACCAACAGCCACACGCATGATCAAATGCTGCGGACGC 185065 Query 63747 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63806 || | | |||| || || || | ||| || || || | || || ||||||||| Sbjct 185066 TCCGCCACCTTGCCATTGATCTTGAGCAAATATGAACGCTCGAGCGTCTTGAAACCAAAA 185125 Query 63807 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 |||||||| |||||| || || || || || |||| ||||| Sbjct 185126 TAGTTGTAGCCAAAGTCACGATCATAGATGATCGCCGAATTGAG 185169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946039760840