Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq61 111 2e-19 seq33 111 2e-19 >seq61 Length=186913 Score = 111 bits (122), Expect = 2e-19 Identities = 339/524 (65%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 63182 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63241 ||||| || || | ||| ||||| | | || || || ||||| ||||| || || | | Sbjct 184646 TGCCAAGGCTCGAGGTACATGGCAAACGCACCCGGGCGCTTGTTCCCTCCTTGGTCAACG 184705 Query 63242 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 63301 || | || ||||| || | || | || ||| || | | |||||||| || |||||| Sbjct 184706 TAGCGCGCCGTGTTGTTGAACACGCGCAGCATAGGCAACAGACCATTGGCCGTGCCATTG 184765 Query 63302 GTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63361 || || | || || || |||| || || || || | || || || || Sbjct 184766 GTGCCGGCAATGTACGAGCCCGTGGCGCGGATGTTGTGGATGTTCAAGCCAATGCCGCCG 184825 Query 63362 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 63421 ||| | || |||||| || || | || | ||| || ||||||||||| || || Sbjct 184826 GCCGTCTTGGAGATTTGCGCACAGCACTTGAGCGTCTCGTAGATGCCCTCAATCGAGTCC 184885 Query 63422 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 63481 ||| |||| | || | || || |||||||| | ||| || || ||||| || Sbjct 184886 TCCTTCATAGTCAGCAAGAAGCACGACGACATTTGCGGGCGAGGCGTGCCGGCATTGAAC 184945 Query 63482 AAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63541 || || || ||||| || || || || || | || | ||||||||| | ||| Sbjct 184946 AACGTCGGGCTCGCGTGCGTGAAGAATCGCTCCGACATGAGCTGGTACGTCTCCAAAGCG 185005 Query 63542 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63601 | || || || ||| || || || || |||||||| | || ||||| || | Sbjct 185006 GCATCAATGTCTTCGCCATGGATACCAACAGCCACACGCATGATCAAATGCTGCGGACGC 185065 Query 63602 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63661 || | | |||| || || || | ||| || || || | || || ||||||||| Sbjct 185066 TCCGCCACCTTGCCATTGATCTTGAGCAAATATGAACGCTCGAGCGTCTTGAAACCAAAA 185125 Query 63662 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 |||||||| |||||| || || || || || |||| ||||| Sbjct 185126 TAGTTGTAGCCAAAGTCACGATCATAGATGATCGCCGAATTGAG 185169 >seq33 Length=455653 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734 ||| | ||||||||| | | ||| | |||||||| ||||| | || ||||| | ||| Sbjct 391094 GTGCAAACCCTCGTCACGGCAAATCAGCTCGTTGGAGAACGTCAAGCCAGGCATCAAGCC 391153 Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794 ||||| || |||||||| ||||||||||| | ||||| |||||||| || || || || Sbjct 391154 GCGCTTCTTGAGCCAAAAGATGGACGCAAACGCACCAGAGAAGAAAATGCCCTCAACCGC 391213 Query 32795 CGCAAAGGCAATAAGTCTCTC 32815 |||||| |||| ||| | ||| Sbjct 391214 CGCAAAAGCAACAAGGCGCTC 391234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630819860400