Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq28 118 8e-21 seq27 87.8 1e-11 >seq28 Length=465108 Score = 118 bits (130), Expect = 8e-21 Identities = 200/290 (69%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| || ||||| || ||||| ||||| | ||| | || | || || | ||| Sbjct 182124 ACGAGACGGTTGTCAAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGCCTTGACT 182065 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | || | ||||| || | | ||| || | |||||| ||| |||||||||| ||| Sbjct 182064 TCAAAGATGCCATCCTCGATGGTCAAGAGCGACACATCAAAGGTACCACCACCCAAATCG 182005 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || || ||||||||||| |||| ||||| Sbjct 182004 AAGATGAGCACGTTGCGCTCGCCCTCGGTCTTCTTGTCAAGACCATAGGCAATGGCAGCG 181945 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || || || || || | | || || | ||| ||||| || ||||| || Sbjct 181944 GCAGTGGGCTCGTTGATGATGCGGAGCACGTTCAAACCGGCAATCAAACCAGCATCCTTG 181885 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 |||||||| | || |||||||| ||||| ||||| || || || ||||| Sbjct 181884 GTGGCTTGGCGCTGCGAATCGTTGAAATAGGCAGGGACCGTGATGACGGC 181835 >seq27 Length=474733 Score = 87.8 bits (96), Expect = 1e-11 Identities = 139/199 (70%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| ||| |||||||| | ||| | | | || || |||| ||| ||| Sbjct 213959 ACATCAAAGGTACCACCACCAAGATCGTAGACCAAGACCGTCTTTTCGCCGTC---GTTC 213903 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || ||||||||||| |||| ||||| ||||| || || || || || | | | || Sbjct 213902 TTGTCAAGACCATAGGCAATGGCAGCGGCAGTGGGCTCGTTGATGATACGGAGGATGTTG 213843 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || |||||||| | || || || || ||||| || | || | |||||| ||||| ||| Sbjct 213842 AGGCCAGCAATGGTACCGGCGTCCTTGGTGGCCTGGCGCTGGGCATCGTTGAAATAGGCA 213783 Query 518288 GGAACAGTAATAACGGCAT 518306 |||||||| | || |||| Sbjct 213782 GGAACAGTGACGACAGCAT 213764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780815006129194