Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq5 174 2e-38 seq15 149 8e-31 >seq5 Length=887111 Score = 174 bits (192), Expect = 2e-38 Identities = 333/491 (68%), Gaps = 0/491 (0%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || ||||||| ||||| || || || || || || || ||||| | |||||| ||||| Sbjct 16765 CCCGTGGCAAGGACAAAGTCTTCGGGCTCGTCCTGCTGGAGCATGAGCCACATGCCCTCG 16706 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || || || |||| || ||||| || || || |||| || || | ||| || || Sbjct 16705 ACGTAGTCCTTGGCGTGGCCCCAATCGCGCTTGGCGTCAATGTTGCCCAAATACAAGCAT 16646 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTT 47967 || || ||| ||| | | || | | ||||| || || ||||| || Sbjct 16645 TCCTGGCGACCCAAGTGGATGTCGGCGACAGCACGGCTGATCTTGCGGGTGACAAAGGTG 16586 Query 47968 TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTAT 48027 ||||| | ||||| || || ||||| || || ||| | || || ||||| ||| Sbjct 16585 CGGCCACGGCGGGGAGACTCGTGGTTAAACAGGATGCCATTGCACGCGTACATGTTGTAG 16526 Query 48028 GATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAA 48087 || || || ||||| || |||||||| ||||| || || ||||||||||| || || Sbjct 16525 GACTCGCGGTAGTTGACGACGATCCAGTAGCCATACAGCTTGGCAACACCATAGGGCGAG 16466 Query 48088 CGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCA 48147 || || ||||| || |||||||| | || |||||||| ||||| ||||| || ||| Sbjct 16465 CGAGGGTAGAAGGGCGTGGTCTCCTTTTGGGGAGTCTCGACAACCTTGCCATACAGCTCA 16406 Query 48148 CTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCA 48207 |||||| ||||| |||| || || | ||| | || | |||| || || Sbjct 16405 GAGGTGGAGGCTTGGTAGAAGCGCACGCGATCAGAAAGACCACACGTGCGGATGGCGTCC 16346 Query 48208 AGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAA 48267 | || | ||| ||||| | |||||| | |||||| ||||||| ||| ||||| || Sbjct 16345 AACAGGCGCAGAGTGCCAAGGGCATCGACATCACCAGTGTACTCGGACATGTCAAAAGAC 16286 Query 48268 ACCTTTACATG 48278 ||||| || || Sbjct 16285 ACCTTGACGTG 16275 >seq15 Length=628964 Score = 149 bits (164), Expect = 8e-31 Identities = 474/737 (64%), Gaps = 21/737 (3%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || ||||| | |||||| || || || || || || || ||||| | |||||| ||||| Sbjct 137911 CCCGTGGCCAGAACAAAGTCTTCGGGCTCGTCCTGCTGGAGCATGAGCCACATGCCCTCG 137852 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || || || |||| || ||||| || || || |||| || || | ||| || || Sbjct 137851 ACGTAGTCCTTGGCGTGGCCCCAATCGCGCTTGGCGTCAATGTTGCCCAAATACAAGCAT 137792 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTT 47967 || || ||| ||| | | || | | ||||| || || ||||| || Sbjct 137791 TCCTGGCGACCCAAGTGGATGTCGGCGACAGCACGGCTGATCTTGCGGGTGACAAAGGTG 137732 Query 47968 TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTAT 48027 ||||| | ||||| || || || || || || ||| | || || ||||| ||| Sbjct 137731 CGGCCACGGCGGGGAGACTCGTGGTTGAACAGGATGCCATTGCACGCGTACATGTTGTAG 137672 Query 48028 GATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAA 48087 ||||| || || || || |||||| | ||||| || || ||||||||||| || || Sbjct 137671 GATTCGCGGTAATTGACGACGATCCAGAAGCCATACAGCTTGGCAACACCATAGGGCGAG 137612 Query 48088 CGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCA 48147 || ||||| || || || ||||| | || || ||||| ||||| || || | ||| Sbjct 137611 CGAGGATAAAAGGGCGTAGTCTCCTTTTGGGGCGTCTCGACGACCTTGCCGTACAATTCC 137552 Query 48148 CTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCA 48207 ||||| || || || | || || | || || || | || | || ||| Sbjct 137551 GACGTGGACGCCTGGTAAAAGCGTACACGGTCCGTCAGGCCACACGTGCGAATCGCGTCA 137492 Query 48208 AGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAA 48267 |||| | ||| ||||| | |||||| | ||| || ||||||| ||| ||||| || Sbjct 137491 AGCAGGCGCAGCGTGCCAAGGGCATCCACATCACCCGTGTACTCGGACATATCAAAAGAC 137432 Query 48268 ACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTGCTGAATA 48327 ||||| ||||| |||||| | | |||||| | || ||| || |||||| ||| Sbjct 137431 ACCTTGACATGCGATTGTGCCGCCAAATTATACACTTCTGTTGGCTGCACCTGCGCAATG 137372 Query 48328 ACCCTCACTAAATTTGTAGAGTCTGTTAAGTCTCCATAATGC------AATTTTA---AT 48378 | || ||| || || || || || || |||| ||| ||||| | | Sbjct 137371 ATGTGTACCAAACACGTCGAATCCGTCAAATCACCATGGTGCAAGAAGAATTTGACACCT 137312 Query 48379 TGATC------------ATAAATGTGATCAATTCTATGTGTATTAATTAAAGAAGCCCGA 48426 ||||| ||||| || ||||||| || || | | | || | ||| Sbjct 137311 TGATCGTGGCGATCCTTGTAAATATGCTCAATTCGTCCCGTGTTGAATGATGACGAGCGA 137252 Query 48427 CGGACAATACCATGAACCTCATACCCCTTTTCAAGAAGAAGTTCTGCTAAGTATGAACCA 48486 || | || ||||| ||||| || ||||| ||||| || | ||| | | || || ||| Sbjct 137251 CGAATGATGCCATGCACCTCGTAGCCCTTGTCAAGCAGGAATTCCGTCAGATACGAGCCA 137192 Query 48487 TCTTGTCCTGTAATACC 48503 || || || || | ||| Sbjct 137191 TCCTGACCAGTCACACC 137175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493160516680