Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq65 98.7 3e-15 seq33 84.2 6e-11 >seq65 Length=159763 Score = 98.7 bits (108), Expect = 3e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 251503 CAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGC 251562 ||||| |||||||||||||| || || ||||||||||| || | | ||||||| ||||| Sbjct 61848 CAATCGCGCTCCATTTCACCAAAGCGGAGACCACCATCACGCGAGCGACCCTCGACAGGC 61907 Query 251563 TGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATA 251622 || || ||||| | | || || | |||||| || ||| || | |||||| Sbjct 61908 TGGCGGGTGAGGATTTGGACGGGGCCACGAGCGCGGCTGTGGATCTTGTCGTCGACCATA 61967 Query 251623 TGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 |||||||| ||||||||| | | ||| || | ||||| Sbjct 61968 TGCTTGAGGCGCTGGTAGTAGGTGGGGCCAAGGAAGA 62004 >seq33 Length=455653 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 133508 CGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTAT 133566 || || ||||||||||| | || ||||||||||| ||| ||||||||| ||| || || Sbjct 391231 CGCCTTGTTGCTTTTGCGGCGGTTGAGGGCATTTTCTTCTCTGGTGCGTT-TGCGTCCAT 391173 Query 133567 TTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTC 133626 |||||||| || ||||| || | | ||||| || || || ||||| || |||| Sbjct 391172 CTTTTGGCTCAAGAAGCGCGGCTTGATGCCTGGCTTGACGTTCTCCAACGAGCTGATTTG 391113 Query 133627 AAGGGACGAGGCACTTCACACCGAATTTGC 133656 | ||||||| | ||||| || ||||| Sbjct 391112 CCGTGACGAGGGTTTGCACACGGACTTTGC 391083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814790208213