Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq45 89.7 4e-13 seq56 82.4 6e-11 >seq45 Length=303593 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| ||| | || ||||| ||||| || | || ||| | | Sbjct 86428 ATGCAAATTTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTGGAGGTCGAGTCGTCC 86487 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||| || ||| | | || || ||||| || ||||| || ||| | ||| ||||| Sbjct 86488 GATTCTATCGACAACGTCAAGCAGAAAATCCAAGACAAGGAGGGCATTCCCCCCGATCAG 86547 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | | |||| ||| || || ||||||||||| | | | || || | || |||||| Sbjct 86548 CAGCGTTTGATTTTTGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGTCTGACTACAAC 86607 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || ||||| || || || ||||| |||| Sbjct 86608 ATCCAAAAGGAGTCCACTCTGCACTTGGT 86636 >seq56 Length=224513 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 ||||| ||| |||| || | ||| || || || ||||||||| | | || || ||||| Sbjct 32539 GATCAGCAACGACTCATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACGCTGTCGGAT 32480 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||||| || || ||||||||| ||||| | || |||| || || Sbjct 32479 TACAACATCCAAAAGGAGTCGACGTTGCACCTGGTGCTGCGATTGCGCGGCGG 32427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840850305457