Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq56 131 1e-25 seq45 120 2e-22 seq30 118 7e-22 seq94 89.7 3e-13 >seq56 Length=224513 Score = 131 bits (144), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| | ||| |||||||| | || |||||| || ||||| || ||||| Sbjct 32427 CCGCCGCGCAATCGCAGCACCAGGTGCAACGTCGACTCCTTTTGGATGTTGTAATCCGAC 32486 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| |||| |||||| ||||| ||||| ||||||||||| || |||| Sbjct 32487 AGCGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATGAGTCGTTGCTGATCAGGCGGA 32546 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATT----GGCCTC 34926 | ||||||||||| | || ||||| || || || |||| ||| | | | || Sbjct 32547 ATACCCTCCTTGTCTTGGATCTTTTGCTTCAC--AT--TATCAATTGAATCCGACGATTC 32602 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 || |||| || |||||||| || ||||| ||||| || ||||| ||||||| Sbjct 32603 AACCTCAAGTGTGATGGTCTTGCCAGTGAGCGTCTTGACGAAGATTTGCATGA 32655 >seq45 Length=303593 Score = 120 bits (132), Expect = 2e-22 Identities = 159/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| |||||||| ||||| || || || | | |||| | || Sbjct 87323 AGGACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAATCAGACAAGGTGCGGCCGTCT 87264 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| ||||| ||||| || || |||||||| | || | || |||||||| Sbjct 87263 TCCAATTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCT 87204 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATT-GGCC---TCGACATCAACGGTTAT 34941 | || ||||| ||||| || | ||||| | | || | ||||| || | || || Sbjct 87203 TGGATCTTTTGCTTGAC--AT--TGTCGATGGAGTCGGACGATTCGACCTCCAAAGTGAT 87148 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || || | |||||| ||||||||||||||| Sbjct 87147 GGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCATG 87111 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | ||| |||||| || ||||| ||||| || || |||| | || Sbjct 86640 CAGAACCAAGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAGCGTGCGGCCGTC 86581 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| ||||| || |||| || ||||| || | || | ||||||||||| Sbjct 86580 CTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGCTGATCGGGGGGAATGCCCTCCTTGTC 86521 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| || |||||| | || || || | |||||| || | || ||||| Sbjct 86520 TTGGATTTTCTGCTTGACGTTGTCGATAGAATCGGACGACTCGACCTCCAGAGTGATGGT 86461 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||| ||||| || || || ||||| Sbjct 86460 CTTGCCAGTGAGAGTCTTGACGAAAATTTGCAT 86428 Score = 105 bits (116), Expect = 4e-18 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||||| || ||||| ||||| || || |||| | || Sbjct 87551 AGGACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGCGTGCGGCCGTCT 87492 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || ||||| ||||| || || || ||||| | || | || |||||||| Sbjct 87491 TCCAATTGTTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCTTCCTTGTCT 87432 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATT-GGCC---TCGACATCAACGGTTAT 34941 | || ||||| ||||| || | ||||| | | || | ||||| || | || || Sbjct 87431 TGGATCTTTTGCTTGAC--AT--TGTCGATGGAATCGGACGATTCGACCTCCAAAGTGAT 87376 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || || | |||||| ||||||||||||||| Sbjct 87375 GGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCATG 87339 >seq30 Length=460931 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||| ||| | ||| ||||| || ||||| ||||| || || |||| |||| Sbjct 195532 CAGGACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGGCCATC 195591 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| ||||| || || |||||||| | || | || |||||||| Sbjct 195592 CTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGAGGGATACCTTCCTTGTC 195651 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || ||||| ||||| | || || || | |||||| || | ||| ||||| Sbjct 195652 CTGGATCTTTTGCTTGACATTGTCGATGGAATCCGACGACTCGACCTCGAGGGTGATGGT 195711 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | ||||| |||||||||||||| Sbjct 195712 CTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 195744 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| || ||||| ||||| || || |||| |||| Sbjct 196217 AGCACCAAGTGCAACGTGGACTCCTTTTGGATGTTGTAGTCAGACAGCGTGCGGCCATCC 196276 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 196277 TCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCT 196336 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| ||||| | || || || | |||||| || | || |||||| Sbjct 196337 TGAATCTTTTGCTTGACATTGTCAATAGAGTCCGACGACTCGACCTCCAGAGTGATGGTC 196396 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||| ||||| || || || |||||| Sbjct 196397 TTGCCAGTGAGAGTCTTGACGAAAATTTGCATG 196429 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||||| || ||||| || || || | | |||| |||| Sbjct 195989 AGGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAATCAGACAAGGTGCGGCCATCT 196048 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| ||||| ||||| || || |||||||| | || | || |||||||| Sbjct 196049 TCCAATTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 196108 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| ||||| | || || || | |||||| || | || |||||| Sbjct 196109 TGGATCTTTTGCTTGACATTATCAATGGAATCCGACGACTCGACCTCGAGCGTGATGGTC 196168 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||||| |||||||||||||| Sbjct 196169 TTGCCAGTCAAAGTCTTAACAAAGATCTGCAT 196200 >seq94 Length=66050 Score = 89.7 bits (98), Expect = 3e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | || ||||| || ||||| ||||| || | |||| |||| Sbjct 22814 AGGACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAACGTGCGGCCATCT 22873 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| ||||||||||||| || |||||||| | || | ||||||||||| Sbjct 22874 TCCAATTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 22933 Query 34886 TTTATTTTTTGTTTGAC 34902 | || ||||| ||||| Sbjct 22934 TGGATCTTTTGCTTGAC 22950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692208562231