Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq33 113 4e-20 >seq33 Length=455653 Score = 113 bits (124), Expect = 4e-20 Identities = 315/478 (66%), Gaps = 9/478 (2%) Strand=Plus/Minus Query 44120 TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTT 44179 |||| || || ||||| || ||||| | || || ||||||||||| || || ||||| Sbjct 391240 TTTGCCGAGCGCCTTGTTGCTTTTGCGGCGGTTGAGGGCATTTTCTTCTCTGGTGCGTTT 391181 Query 44180 GCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAG 44239 ||| |||| |||||| | ||||| || || ||||||||||| |||||||| || || ||| Sbjct 391180 GCGTCCATCTTTTGGCTCAAGAAGCGCGGCTTGATGCCTGGCTTGACGTTCTCCAACGAG 391121 Query 44240 TTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTA 44299 | || | ||||| || || || || || ||||| ||| || | |||| |||| Sbjct 391120 CTGATTTGCCGTGACGAGGGTTTGCACACGGACTTTGCGTGCCTGCTCTTTGGCCATCTG 391061 Query 44300 GGAGACGATAAGCCTTCATGTAAGACAAT-TAC-AGATATTGTTGTAGAGGCAGTAAAGA 44357 | | | | |||||| | ||| | | | ||||| | ||||| || |||| Sbjct 391060 CG---CAACACGCCTTC--CAATGACCGTGTGCGCGATATCATCACCGAGGCCGTCAAGA 391006 Query 44358 TAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTTT 44417 | || |||||||| |||| || | ||||| | || || ||||| Sbjct 391005 TTGAGCAAGAATTCCTGACCGACGCGCTGCCTGTCGCGCTCATTGGCATGAACTCCAAGC 390946 Query 44418 TGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATA 44477 | ||| |||||| ||||||| |||| || || | || | | || || || | Sbjct 390945 TCATGTGCCAATACATTGAATTTGTTGCGGACCGCCTGCTCGTTGCTCTTGGCCAGGACA 390886 Query 44478 AACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAA 44537 | ||||| | | | || || ||||| |||||||| || ||| | | ||||| | Sbjct 390885 AGCACTACAAGGCAACCAATCCCTTTGACTTTATGGACCTCATCTCGCTCCAGGGCAAGA 390826 Query 44538 CAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAACAAG 44595 | || || ||||| || || || || || ||||| ||||||||| |||||| Sbjct 390825 CCAATTTCTTTGAGAAGCGTGTCTCTGACTACCAGCGTGCTGGCGTCATG--AACAAG 390770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455278244745