Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq61 109 8e-19 >seq61 Length=186913 Score = 109 bits (120), Expect = 8e-19 Identities = 574/910 (63%), Gaps = 10/910 (1%) Strand=Plus/Plus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 ||||| || || | ||| || |||||||| ||||| || || || |||||| || Sbjct 184265 ATCTCCGTGCACAAATTGCTGCATTTGATGGTGCCGAGGTTCTGCTGGTTGGATTTGCGG 184324 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852 ||||| | |||||| || | || |||||| | || || || |||| | |||| ||| Sbjct 184325 TTGCACGCGTCCTTGTACAAGATGAACGGATTGCCCGTCTCGGTCTGGGCCTCGAGAATC 184384 Query 77853 GATTTCCAGACGACTCTAGCT--TTTATCATA-GATTTGTATCGCCTCTCTCTTTCATAT 77909 | | ||| | ||| | || || ||| | | | | ||| ||| |||| || Sbjct 184385 GCGTACCACA--ACTTTTGCGCCTTGATCGTCTGGCGCGCACGGCC-CTCCTTTTCGTAC 184441 Query 77910 TGAGTATATA--GCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCAT 77967 | | | | ||| || |||||||| ||||| || || | ||| || || | Sbjct 184442 TTTTCAAACAAGGCC--TCGAATTCATCGCCCCACACCTCGTGCAAATTGGGCGCCTCGT 184499 Query 77968 TTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTA 78027 | ||||| | | |||||||| |||| ||| || || ||||| || | |||||| | Sbjct 184500 TGGGGCAAAAGAGCGACCAGTCGCCATTGGCCTCGACACGCTTCATGAACAAATCAGGCA 184559 Query 78028 TCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAA 78087 ||| || || ||| | ||| || | | || || || || ||||| | Sbjct 184560 CCCAGAGCGCGTAAAACAAATCGCGCGCGCGGATCTCGTCCTTGCCCACGTTCTTGCGCA 184619 Query 78088 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAG 78147 || | ||| | ||| || | ||||| || || || || || || | | || | Sbjct 184620 ATTCCAAAAAGGTGAAAATGTCGGCGTGCCAAGGCTCGAGGTACATGGCAAACGCACCCG 184679 Query 78148 GTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTG 78207 | || || || ||||| || || | || | || ||||| || | || | || ||| | Sbjct 184680 GGCGCTTGTTCCCTCCTTGGTCAACGTAGCGCGCCGTGTTGTTGAACACGCGCAGCATAG 184739 Query 78208 GAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATAT 78267 | | | ||| || | || ||||| || || | ||| || || | ||||| || | Sbjct 184740 GCAACAGACCATTGGCCGTGCCATTGGTGCCGGCAATGTACGAGCCCGTGGCGCGGATGT 184799 Query 78268 TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATG 78327 | ||| | || || || || ||| |||| || ||| | || || | || | | Sbjct 184800 TGTGGATGTTCAAGCCAATGCCGCCGGCCGTCTTGGAGATTTGCGCACAGCACTTGAGCG 184859 Query 78328 TATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTT 78387 | |||||||| ||||| || ||| ||| |||| | || | || || ||||||| Sbjct 184860 TCTCGTAGATGCCCTCAATCGAGTCCTCCTTCATAGTCAGCAAGAAGCACGACGACATTT 184919 Query 78388 GATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAG 78447 | | || || || ||||| || || ||||| || ||||| || || || | Sbjct 184920 GCGGGCGAGGCGTGCCGGCATTGAACAACGTCGGGCTCGCGTGCGTGAAGAATCGCTCCG 184979 Query 78448 AAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTA 78507 | | || | ||| || || | ||| | || ||||| ||| || || || || | Sbjct 184980 ACATGAGCTGGTACGTCTCCAAAGCGGCATCAATGTCTTCGCCATGGATACCAACAGCCA 185039 Query 78508 CACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATG 78567 ||||||| | || |||||| || | || || ||| ||| || || | ||| |||| Sbjct 185040 CACGCATGATCAAATGCTGCGGACGCTCCGCCACCTTGCCATTGATCTTGAGCAAATATG 185099 Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAA 78627 | || | || || ||||||||||||||||| |||||| | || || || || Sbjct 185100 AACGCTCGAGCGTCTTGAAACCAAAATAGTTGTAGCCAAAGTCACGATCATAGATGATCG 185159 Query 78628 CAGAATTTAG 78637 | ||||| || Sbjct 185160 CCGAATTGAG 185169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667506179360