Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq61 102 1e-16 >seq61 Length=186913 Score = 102 bits (112), Expect = 1e-16 Identities = 682/1092 (62%), Gaps = 14/1092 (1%) Strand=Plus/Plus Query 76328 ATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTG 76387 ||||||||||| | ||| || || ||||| || || || || || |||||| || | Sbjct 184265 ATCTCCGTGCACAAATTGCTGCATTTGATGGTGCCGAGGTTCTGCTGGTTGGATTTGCGG 184324 Query 76388 TTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATA 76447 || || | |||||| || | | |||||| | || || || |||| | |||| ||| Sbjct 184325 TTGCACGCGTCCTTGTACAAGATGAACGGATTGCCCGTCTCGGTCTGGGCCTCGAGAATC 184384 Query 76448 GATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT----CTCTCTTTCATA 76503 | | ||| | ||| | || | | || | | || ||| ||| |||| || Sbjct 184385 GCGTACCACA--ACTTTTGCGCCT-TGATCG-TCTGGCGCGCACGGCCCTCCTTTTCGTA 184440 Query 76504 TTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATT 76563 | | | | || || |||||||| ||||| || || | |||| || || || Sbjct 184441 CTTTTCAAACAAGGCCTCGAATTCATCGCCCCACACCTCGTGCAAATTGGGCGCCTCGTT 184500 Query 76564 CGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTAT 76623 || || | | ||||| || |||| ||| || || ||||| || | |||||| | Sbjct 184501 GGGGCAAAAGAGCGACCAGTCGCCATTGGCCTCGACACGCTTCATGAACAAATCAGGCAC 184560 Query 76624 CCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAG 76683 ||| || || ||| | ||| || | | || || || || ||||| | Sbjct 184561 CCAGAGCGCGTAAAACAAATCGCGCGCGCGGATCTCGTCCTTGCCCACGTTCTTGCGCAA 184620 Query 76684 ATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGG 76743 || | || | ||| || | ||||| || || || || || || | ||||||| Sbjct 184621 TTCCAAAAAGGTGAAAATGTCGGCGTGCCAAGGCTCGAGGTACATGGCAAACGCACCCGG 184680 Query 76744 TCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGG 76803 || || || ||||| || || | || | || ||||| || | || | || ||| || Sbjct 184681 GCGCTTGTTCCCTCCTTGGTCAACGTAGCGCGCCGTGTTGTTGAACACGCGCAGCATAGG 184740 Query 76804 AATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATT 76863 | | || || | || ||||| || || | ||| || || || || || || Sbjct 184741 CAACAGACCATTGGCCGTGCCATTGGTGCCGGCAATGTACGAGCCCGTGGCGCGGATGTT 184800 Query 76864 ACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGT 76923 || | ||| || || || ||| | || |||||| | ||||||| || | || Sbjct 184801 GTGGATGTTCAAGCCAATGCCGCCGGCCGTCTTGGAGATTTGCGCACAGCACTTGAGCGT 184860 Query 76924 GTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 76983 || ||||||||||| || || ||| |||| | || | || || |||||||| Sbjct 184861 CTCGTAGATGCCCTCAATCGAGTCCTCCTTCATAGTCAGCAAGAAGCACGACGACATTTG 184920 Query 76984 ATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA 77043 | || || || ||||| ||||| || || || || ||||| || || || Sbjct 184921 CGGGCGAGGCGTGCCGGCATTGAACAACGTCGGGCTCGCGTGCGTGAAGAATCGCTCCGA 184980 Query 77044 AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGAC 77103 | || | ||| || || | | | || || || || ||| || || ||||| || Sbjct 184981 CATGAGCTGGTACGTCTCCAAAGCGGCATCAATGTCTTCGCCATGGATACCAACAGCCAC 185040 Query 77104 ACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGA 77163 |||||| | || |||||| || || || | ||| ||| || || | ||| ||||| Sbjct 185041 ACGCATGATCAAATGCTGCGGACGCTCCGCCACCTTGCCATTGATCTTGAGCAAATATGA 185100 Query 77164 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAAC 77223 || | || || ||||||||||||||||| |||||| | || || || || | Sbjct 185101 ACGCTCGAGCGTCTTGAAACCAAAATAGTTGTAGCCAAAGTCACGATCATAGATGATCGC 185160 Query 77224 CGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATG-AC--AGTGGTAGAAATAAT 77280 |||||| || ||| | |||| | | || || || ||| ||| || || Sbjct 185161 CGAATTGAGCCGGTC---AGCATTGGCCATCACCACCTTGTACGTTGTGTCAGAGATCAT 185217 Query 77281 TGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCT 77340 || | || | || || || || ||||| | | || || || || | Sbjct 185218 GGGCGCACGCTTGTTGTTCTTGGGGTTGGTATAGTGGTACAGATCATCAATCACCTGCGA 185277 Query 77341 AAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGC 77400 ||| | || || || |||||||| |||||||| | || || | ||||| ||||| || Sbjct 185278 AAACACCTTCTTCGTCTCCTTGTGCAGATTCGAAATCGCAATGCGCGCAGCAAGAATCGC 185337 Query 77401 ATAGTCAGGATG 77412 |||||||||||| Sbjct 185338 ATAGTCAGGATG 185349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933072159680