Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq34 120 3e-22 >seq34 Length=381833 Score = 120 bits (132), Expect = 3e-22 Identities = 303/453 (67%), Gaps = 12/453 (3%) Strand=Plus/Plus Query 15913 TTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTC 15972 ||| |||||| || || ||||| |||||||| || || || | | ||| || | || Sbjct 49646 TTGATAATCAGACACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAAATCATGTC 49705 Query 15973 CATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAA 16032 |||||| |||||||| || | | | | | ||| | |||| | | | Sbjct 49706 CATAAAGTCAAAGGGGTTGATGGATTTGTACACCTTTTCTTGGCCCAAGGCGACCAGCAG 49765 Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAA-GTCGCAATTAATTCCTAT-AAGT 16090 | || || || ||||| || ||||| ||||| || || ||| || || || || ||| Sbjct 49766 ACGGTCAGCAACGAATTCAATGTATTGGCACATCAACGTGGCA-TTCATGCCAATCAAGG 49824 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || || || | || | ||||| |||| |||||| ||| || ||||| |||||| Sbjct 49825 CG-ACAGGCAAGGCATCGGTTAAGAATTCTTGTTCGATCTTGACGGCTTCGACAATGATT 49883 Query 16151 TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGG----TGTTTAAACATTAGACACGC 16206 || ||| ||| || || | || | | ||| | || | |||| ||||| || Sbjct 49884 TCCGTGATACGT---TCGGA-GCTGGGTTGCTTATGGATGTGGCTGAACAGCAGACAGGC 49939 Query 16207 GAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGG 16266 |||||| || || |||||||| | || || ||||||||||| || || || || || Sbjct 49940 AAAGTCGGTGTGGAGGCCTTCGTCGCGGCAAATCAGTTCGTTGGAGAAGGTCAAACCAGG 49999 Query 16267 CATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACC 16326 ||| || || ||||| |||||||| || | ||||| | ||||| ||||| ||||| Sbjct 50000 CATCAAGCCCCGCTTCTTCAACCAGAAGATGGAGGCAAAGGCGCCCGAGAAGAAAATACC 50059 Query 16327 CTCAACAGATGCAAAAGCGATTAATCGTTCCGC 16359 || |||| ||||| || | || ||||| || Sbjct 50060 TTCGACAGCAGCAAAGGCCACCAAGCGTTCAGC 50092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413671234480