Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq27 111 1e-19 >seq27 Length=1513655 Score = 111 bits (122), Expect = 1e-19 Identities = 153/211 (73%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATA--GTGCGCGTATCCTC 118588 |||| |||| || || ||||||||||||||||| | || ||| || || |||||| Sbjct 1427445 CAAGATGGAGAGTGGATTCTTTTTGAATGTTGTAGT--CTGATAGGGTACGGCCATCCTC 1427502 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || || || || | || | ||| || ||||| ||||| ||||| ||||||||| Sbjct 1427503 CAGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCTTG 1427562 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || || || || | || |||| | |||||| || | || | ||||| Sbjct 1427563 AATCTTCTGCTTGACATGCTCAATGGCATCCGAGGACTCGACTTCCAATGTAATAGTTTT 1427622 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || |||| |||||| ||||| || |||||| Sbjct 1427623 TCCAGTCAAAGTTTTGACAAAGATTTGCATG 1427653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829797246888