Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq38 122 2e-22 >seq38 Length=1275103 Score = 122 bits (134), Expect = 2e-22 Identities = 427/657 (65%), Gaps = 11/657 (2%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| | ||| | | ||||| |||||||| ||||| || ||| | ||||| || Sbjct 989615 GATTTTGGCTACAACTACTTTGGCTTCAAAACTCTGGAACGGTCTTATTTGCTCAAGATC 989556 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 |||| || | | || || ||| ||| || | ||||| ||||| |||||||||||| Sbjct 989555 AATGGGAAAGTGGCTGAGCGTCCTCAACACTTGATCATGCGTGTGGCCGTCGGGATTCAC 989496 Query 248929 AAGGATGACATAGAGAGCGTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGA 248986 || ||||| || || ||| | || || ||| ||| || |||| | | Sbjct 989495 GGCGACGACATCGA-TGC-TGCTTTGGAAACCTACCAATTGATGTCCGAGCGCTTCTTCA 989438 Query 248987 CACATGCCACACCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGC 249045 | ||||||| || ||||||||||||||||| || | || | ||| || ||||||| Sbjct 989437 CCCATGCCAGCCCTACGCTCTTCAACGCCGGCACGCCTCGTC-CTCAAATGTCCTCGTGC 989379 Query 249046 TTTCTTCTTG-CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC 249104 ||| ||||| ||||| | || ||||| |||| ||||| || || || || || Sbjct 989378 -TTCCTCTTGACCATGAAGGAAGACTCGATCGAAGGCATCTACGAAACCCTCAAGTCTTG 989320 Query 249105 GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAA 249164 || | || || || ||| ||||| || |||||| | || ||||||||| || | Sbjct 989319 TGCCCAAATCTCCAAGACCGCTGGCGGCATTGGTCTCAACATCCACAACATCCGTGCCAC 989260 Query 249165 GGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATG 249224 || || ||||| || || || || | | ||| || | ||| | || ||| Sbjct 989259 TGGCTCTTACATTGCTGGCACCAACGGCTACTCCAACGGTCTCCTGCCCATGCTCCGAGT 989200 Query 249225 CTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGC 249281 ||| | ||| ||| | | | || | || | || | || || | || || Sbjct 989199 CTTCAACAACACTGCCCGCTACGTCGATCAAGGTGGCAACAAGCGTCCCGGTGCTTTTGC 989140 Query 249282 CATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAA 249341 |||||| ||||| |||||||||||| | || || ||||| | |||||| Sbjct 989139 CATGTACCTGGAACCTTGGCACGCCGATGTCTTCACCTTTTTGGACCTTCGCAAGAACGT 989080 Query 249342 CGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTT 249401 |||||| || || | || ||||| || ||||| | |||||||| | || | || Sbjct 989079 CGGCAAGGACGAAATCCGTGCCCGTGATCTGTTCTATGCGCTGTGGGTGCCTGATCTCTT 989020 Query 249402 CATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCC 249458 |||| || || | ||| ||||||| ||| |||| | | ||| ||| ||||| Sbjct 989019 CATGAAGCGTGTGGAAGCCAACGGCGAGTGGTCGCTGTTCTGTCCCAACGAAGCCCC 988963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764831629952