Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq27 91.5 1e-13 >seq27 Length=1513655 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || || |||||||||||||| || || | || |||||||| || ||||| || Sbjct 1427462 TCTTTTTGAATGTTGTAGTCTGATAGGGTACGGCCATCCTCCAGTTGCTTGCCGGCAAAA 1427521 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||| || ||||| || ||||| | || |||||||| ||| || ||||| || | Sbjct 1427522 ATCAAACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGAATCTTCTGCTTGACATGC 1427581 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | ||| ||| || |||| ||||| || || || |||| ||| || ||| Sbjct 1427582 TCAATGGCATCCGAGGACTCGACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACA 1427641 Query 45326 AAGATTTGCATGTTG 45340 |||||||||||| || Sbjct 1427642 AAGATTTGCATGATG 1427656 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| ||| ||||| || |||||||||||| || |||| |||| ||| Sbjct 550377 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCGTCTTCC 550318 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| || || || || |||| || |||||||| ||||| | ||| || ||||| | Sbjct 550317 AATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCAGGAGGAATACCTTCTTTGTCTTGA 550258 Query 45248 ATTTTTTGCTTAAC 45261 || |||||||| || Sbjct 550257 ATCTTTTGCTTGAC 550244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074651092394