Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq34 152 1e-31 >seq34 Length=381833 Score = 152 bits (168), Expect = 1e-31 Identities = 304/449 (68%), Gaps = 15/449 (3%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||||||| || ||||| || ||||| || || || || ||||| |||||| Sbjct 50080 GTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCGGGCGCCTTTGCCTCCATCTTCTGG 50021 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| |||| | |||||||| | |||| |||||| || | |||| | ||| Sbjct 50020 TTGAAGAAGCGGGGCTTGATGCCTGGTTTGACCTTCTCCAACGAACTGATTTGCCGCGAC 49961 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 ||||| || || ||||||||| || ||||||| | | | ||| | | Sbjct 49960 GAAGGCCTCCACACCGACTTTGCCTGTCTGCTGTTCAGCCACA------TCCATAAGCAA 49907 Query 102098 TCAAGA---GAAAGGATTCTTGAAAT---TGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151 | || ||| | || ||||| |||| ||||||||| || ||||||||| Sbjct 49906 CCCAGCTCCGAACGTATCACGGAAATCATTGTC---GAAGCCGTCAAGATCGAACAAGAA 49850 Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211 || | || | | || ||||||| || | || ||||| || ||||||| |||| Sbjct 49849 TTCTTAACCGATGCCTTGCCTGTCGCCTTGATTGGCATGAATGCCACGTTGATGTGCCAA 49790 Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAAT 102271 ||||||||||| || || || || |||| | |||| | ||||||| || || Sbjct 49789 TACATTGAATTCGTTGCTGACCGTCTGCTGGTCGCCTTGGGCCAAGAAAAGGTGTACAAA 49730 Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331 | ||||||||| || ||||||| ||||| ||| | ||||||||||| ||| Sbjct 49729 TCCATCAACCCCTTTGACTTTATGGACATGATTTCTCTCCAAGGCAAGACCAACTTCTTT 49670 Query 102332 GAAAAGAGAGTCGCCGAGTATCAACGTGC 102360 |||||| | || | || ||||||||||| Sbjct 49669 GAAAAGCGTGTGTCTGATTATCAACGTGC 49641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582554588870