Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq34 84.2 2e-11 >seq34 Length=381833 Score = 84.2 bits (92), Expect = 2e-11 Identities = 205/303 (68%), Gaps = 11/303 (4%) Strand=Plus/Plus Query 13885 GTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAA 13942 ||||| || |||| || || | |||||| || || | ||||| || | ||||||| Sbjct 50208 GTTTCAATGGCATCAAACAAGTTTTCCTTTTCAGAAGCATCCTTGATAT--AGGTATCAA 50265 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 | || | || || |||| | ||| || ||||| || || || |||||||| |||| Sbjct 50266 TCAGCAGACTGTAAGTTTCGGCGTGGATATTTTCAATCATGATTTGGAAACCATAGAAAC 50325 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTA-AAATCTTTCTGCCAAGTTTTCATTAACA 14061 | | ||||| | | || | || || | ||| ||| ||||||||||||| ||| Sbjct 50326 ACTTGGCTTCGG-CAATCTTGACTTCGTCCATAAAGTTTTGCACCAAGTTTTCATTGACA 50384 Query 14062 ATACCATCACTAGCT-GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT 14120 ||||| || | |||| ||||| || || | || | |||||||| | || || || Sbjct 50385 ATACCGTC-CGAGCTGGCAAAGAAGGCAAGGATATGCGAGATAAAGTACCGTTCATCCTT 50443 Query 14121 GTTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCA 14177 | | | |||| |||||| | | |||||| || ||||| | ||| ||| | ||||| Sbjct 50444 GGTCATCTTGTTTTCCCAATCACCAAGATCCTTGGAGAGATCAATTTCTTCAGCAGTCCA 50503 Query 14178 AAA 14180 || Sbjct 50504 GAA 50506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588118010960