Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq27 100 2e-16 >seq27 Length=1513655 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | | || | ||||| |||| || ||||| | ||||| || || Sbjct 1427425 GCCACCACGGAGACGAAGGACAAGATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCTGA 1427484 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | ||||| | || |||| ||| ||||||||||||||||| || |||||||| | || Sbjct 1427485 TAGGGTACGGCCATCCTCCAGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCAGGAGG 1427544 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGC-CAACTGTGTCGCCAGCCTCGA 43060 | ||||| || || ||| || ||||| ||| ||| | || | ||||| Sbjct 1427545 AATGCCTTCCTTGTCTTGAATCTTCTGCTTGAC-ATGCTCAATGGCATCCGAGGACTCGA 1427603 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || ||||||||||| || | |||||| ||||| |||||||| Sbjct 1427604 CTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATTTGCAT 1427652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369070134612