Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq38 174 2e-38 >seq38 Length=1275103 Score = 174 bits (192), Expect = 2e-38 Identities = 768/1205 (64%), Gaps = 12/1205 (1%) Strand=Plus/Plus Query 71707 GCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGA 71766 ||||| || || ||||| | |||| || || || | | |||||| || || || Sbjct 988693 GCCAGGTTGCACACGGCGATTTCATCAGGGCTGGAGTACTCGACAATTTCGGTACACAGG 988752 Query 71767 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 71826 ||||| ||||||||||| || | |||||||| || || ||| || ||||| ||| Sbjct 988753 TTACTGCACTTGATGGTGCCGAGGTTTTGTTGGTTGGATTTGCGGTTGCAGGCATCTTTA 988812 Query 71827 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 71886 || || ||||| || | || ||||| | || | ||| || || || | ||| | | Sbjct 988813 TACAGCATAAAGGGGTTGCCGGTTTCGGTTTGGGCTTCCATGATGGCGTACCACAGCTTT 988872 Query 71887 CGAGCCTTTATTATATT-CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTC 71945 | ||||| || | | | | | | || || |||||| | | ||| | ||| Sbjct 988873 TGGGCCTTGATCGTTTGGCGAGCACGGCCTT-CTTGTTCGTAGCGGGCATACAGCTCTTC 988931 Query 71946 GAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCA 72005 ||| || || ||||| | | || | ||||| ||| || ||||| | || ||||| Sbjct 988932 GAATTCATCGCCCCATACTTCGTGCAGACCAGGGGCTTCGTTGGGACAGAACAGCGACCA 988991 Query 72006 CTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATA 72064 ||| || | | | || || ||||| ||||||||||| | ||| || || ||| || | Sbjct 988992 CTCGCCGTTGGCTTCCACACGCTTCATGAAGAGATCAGGCACCCACAGCGC-ATAGAACA 989050 Query 72065 GATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 72124 |||| | || | || || || || ||||| ||| || | || | | | Sbjct 989051 GATCACGGGCACGGATTTCGTCCTTGCCGACGTTCTTGCGAAGGTCCAAAAAGGTGAAGA 989110 Query 72125 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCT 72184 ||| | ||||| ||||||| ||| ||||| | | | || || || ||||| || || | Sbjct 989111 CATCGGCGTGCCAAGGTTCCAGGTACATGGCAAAAGCACCGGGACGCTTGTTGCCACCTT 989170 Query 72185 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 72244 |||| | ||| | || ||||| || | |||| | ||| || | | ||| ||||| Sbjct 989171 GATCGACGTAGCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGCAGGAGACCGTTGGAGT 989230 Query 72245 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTA 72304 || ||||| || | || || ||| ||||||| || ||| || ||||| | Sbjct 989231 AGCCGTTGGTGCCAGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTTGAGACCAA 989290 Query 72305 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 72364 | || || || | || |||||| || || || | || || |||||||| || | Sbjct 989291 TGCCGCCAGCGGTCTTGGAGATTTGGGCACAAGACTTGAGGGTTTCGTAGATGCCTTCGA 989350 Query 72365 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 72424 | || ||| ||||| | | || || || |||||||| ||||| || || | Sbjct 989351 TCGAGTCTTCCTTCATGGTCAAGAGGAAGCACGAGGACATTTGAGGACGAGGCGTGCCGG 989410 Query 72425 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 72484 | || || | ||||| || || || || | || |||| | | ||| || | Sbjct 989411 CGTTGAAGAGCGTAGGGCTGGCATGGGTGAAGAAGCGCTCGGACATCAATTGGTAGGTTT 989470 Query 72485 CAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCT 72544 | | ||| | || || || || || || || || |||||||| | || || | Sbjct 989471 CCAAAGCAGCATCGATGTCGTCGCCGTGAATCCCGACGGCCACACGCATGATCAAGTGTT 989530 Query 72545 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 72604 |||| | ||| | | || ||| || || | ||| || || ||||| |||||| | Sbjct 989531 GAGGACGCTCAGCCACTTTCCCATTGATCTTGAGCAAATAAGACCGTTCCAGAGTTTTGA 989590 Query 72605 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTAT--- 72661 | ||||| |||||||| ||| || || || || || || | |||||||| || Sbjct 989591 AGCCAAAGTAGTTGTAGCCAAAATCGCGGTCATAGATGATGGCTGAATTGAGACGATCGG 989650 Query 72662 CCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCAT 72721 | || | || |||| | ||||| | | || || || || || ||||| || Sbjct 989651 CGTTCTTGATGACAACTTGGTAAGTGGTG-TCC--GAGATCATGGGCGAGTGTTTGCCCG 989707 Query 72722 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 72781 | || || || | |||| | | || || || | |||| || | ||||| |||| Sbjct 989708 TCTTGGGGTTGATATAGGTATACAAGTCTTCGACGACTTGCGAGAACACCTTTTTGGTTT 989767 Query 72782 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTG 72841 | ||||| || || || | || || | ||| || | || ||||| || ||||| ||| Sbjct 989768 CTTTGTGCAGGTTGGAGATAGCAATACGGGCAGCCAAGATAGCATAGTCAGGATG-GGTG 989826 Query 72842 TAGTACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 72900 | || || || || |||| || || ||| |||||||||| || || || || || Sbjct 989827 GTGGTCATGTAAGCAGCCGTTTCAGCAGCAAGATTGTCCAATTCCACAGTGGTCACACCT 989886 Query 72901 TTATA 72905 | ||| Sbjct 989887 TGATA 989891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138243626640