Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 4e-13 >seq27 Length=1513655 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| || ||| || |||||||||||||| || | | || | |||||||| || Sbjct 1427449 ATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCTGATAGGGTACGGCCATCCTCCAGTTG 1427508 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| | |||| ||||| || ||||| || | | ||||||||| ||| || Sbjct 1427509 CTTGCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGAATCTT 1427568 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 |||||||| | | | |||| ||| | ||||| || | ||| || ||||| || || Sbjct 1427569 CTGCTTGACATGCTCAATGGCATCCGAGGACTCGACTTCCAATGTAATAGTTTTTCCAGT 1427628 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 | |||||| ||||| || ||||| Sbjct 1427629 CAAAGTTTTGACAAAGATTTGCAT 1427652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250614724114