Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq56 217 2e-52 seq44 206 4e-49 >seq56 Length=149020 Score = 217 bits (240), Expect = 2e-52 Identities = 210/267 (79%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 16437 AGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 |||||||||||| ||| |||||| |||||||||||||| || |||||||| ||||||||| Sbjct 87437 AGCGTCATCGCAAGAT-TCTTCGTGATAACATCCAAGGTATTACCAAGCCTGCTATCCGT 87379 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||| |||||||||||||| ||||||||| |||| || | |||| ||||| | ||| Sbjct 87378 CGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGGTCTCATCTACGAAGAAACCCGT 87319 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| |||||| ||||| | | | || |||| |||||| || ||| || || || Sbjct 87318 GGTGTGTTGAAGGTCTTCTTGGAAAATGTCATCCGTGATGCCGTCACCTACACTGAACAT 87259 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 || || || ||||||||||| || |||| | |||||||| ||||| || ||||||||| Sbjct 87258 GCCAAGCGCAAGACTGTCACTTCTTTGGACGTTGTCTATGCTTTGAAGCGCCAAGGCCGT 87199 Query 16676 AAGATTTATGGTTTTGGAAGTTAATCT 16702 | | |||||||| || ||||| || Sbjct 87198 ACCCTCTATGGTTTCGGTGGTTAAGCT 87172 >seq44 Length=282398 Score = 206 bits (228), Expect = 4e-49 Identities = 207/266 (78%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 16437 AGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||||||| |||| ||| |||||| |||||||||||||| || |||||||| |||||||| Sbjct 100984 AGCGTCACCGCAAGAT-TCTTCGTGATAACATCCAAGGTATTACCAAGCCTGCTATCCGC 100926 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||| |||||||||||||| ||||||||| |||| || | |||||||||| | ||| Sbjct 100925 CGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGGTCTCATCTATGAAGAAACCCGT 100866 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| |||||| | ||| | | | || |||| |||||| || ||| || || || Sbjct 100865 GGTGTCTTGAAGGTTTTCTTGGAAAATGTCATCCGTGATGCCGTCACCTACACTGAACAT 100806 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 ||||| || ||||| || ||||| |||| | || ||||| ||||| |||||||||||| Sbjct 100805 GCTAAGCGCAAGACCGTTACCTCTTTGGACGTTGTTTATGCTTTGAAGCGTCAAGGCCGT 100746 Query 16676 AAGATTTATGGTTTTGGAAGTTAATC 16701 | | || ||||| || ||||||| Sbjct 100745 ACCCTCTACGGTTTCGGCGGTTAATC 100720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075095769002