Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq27 93.3 4e-14 seq71 89.7 4e-13 >seq27 Length=1513655 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| | || |||||||| ||||| | ||| |||||| Sbjct 1427652 ATGCAAATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTCGAGTCCTCG 1427593 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || | ||| || || || || || ||| || || |||||| | || |||||| Sbjct 1427592 GATGCCATTGAGCATGTCAAGCAGAAGATTCAAGACAAGGAAGGCATTCCTCCTGATCAA 1427533 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| ||| ||||| ||| | || |||| | ||| | | || || ||| Sbjct 1427532 CAACGTTTGATTTTTGCCGGCAAGCAACTGGAGGATGGCCGTACCCTATCAGACTACAAC 1427473 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 ||||||||||| || ||| | ||| Sbjct 1427472 ATTCAAAAAGAATCCACTCTCCAT 1427449 >seq71 Length=978913 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || || || || || ||||| ||| | ||| || ||| Sbjct 432607 ATGCAAATTTTCGTCAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTCGAATCCTCG 432666 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| || ||| | || || ||||| ||| ||||||||||| |||| ||| || Sbjct 432667 GACTCTATTGATAACGTCAAGCAAAAGATTCAAGATAAAGAAGGTATCCCTCCTGACCAA 432726 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||| | ||| ||||| ||| | ||||||| | || | | || || ||| Sbjct 432727 CAACGTCTTATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACTCTCTCTGACTACAAC 432786 Query 115466 ATTCAAAAAGAGTCTAC 115482 || ||||| || || || Sbjct 432787 ATCCAAAAGGAATCCAC 432803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343409037680