Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq27 118 1e-21 seq71 113 4e-20 seq38 111 1e-19 seq21 98.7 9e-16 seq34 89.7 5e-13 >seq27 Length=1513655 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | || || || |||||||||||||| || Sbjct 1427425 GCCACCACGGAGACGAAGGACAAGATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCTGA 1427484 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||||| || |||||||| || | || ||||| || || || ||||| Sbjct 1427485 TAGGGTACGGCCATCCTCCAGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCAGGAGG 1427544 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| || |||||||||| ||||| | | ||| | |||||||| Sbjct 1427545 AATGCCTTCCTTGTCTTGAATCTTCTGCTTGACATGCTCAATGGCATCCGAGGACTCGAC 1427604 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | |||| ||||| || || | |||||| || || || ||||||| Sbjct 1427605 TTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATTTGCATGA 1427654 Score = 102 bits (112), Expect = 8e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| || || | ||| || |||||||| |||||||| ||| | Sbjct 550395 CCACCACGGAGACGCAGCACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 550336 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || | ||||| || || |||| | ||| || ||||| ||||| Sbjct 550335 AAGGTGCGACCGTCTTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCAGGAGGA 550276 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA 131158 || ||||||||||| || || ||||||| Sbjct 550275 ATACCTTCTTTGTCTTGAATCTTTTGCTTGA 550245 >seq71 Length=978913 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | |||||| || || || | ||| || |||||||| |||||||| || Sbjct 433061 CCACCGCGGAGACGCAGAACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAG 433002 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| || |||| | || || ||||| || ||| Sbjct 433001 AGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGGCGTTGTTGGTCAGGGGGG 432942 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||||| | || | || || | ||| || | Sbjct 432941 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATAGAGTCCGAGGATTCAACT 432882 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || | ||| ||||| || || ||||| Sbjct 432881 TCGAGAGTAATGGTCTTGCCAGTCAAAGTCTTTACAAAGATTTGCAT 432835 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | || || |||||||| |||||||| || Sbjct 433289 CCACCACGGAGACGGAGCACAAGGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAG 433230 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| || |||| | || || ||||| || ||| Sbjct 433229 AGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGGCGTTGTTGGTCAGGGGGG 433170 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||||| | || | || || | ||| || | Sbjct 433169 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATAGAGTCCGAGGATTCAACT 433110 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || | ||| ||||| || || ||||| Sbjct 433109 TCGAGAGTAATGGTCTTGCCAGTCAAAGTCTTTACAAAGATTTGCAT 433063 >seq38 Length=1275103 Score = 111 bits (122), Expect = 1e-19 Identities = 951/1518 (63%), Gaps = 62/1518 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||| |||| || || || ||||| | || || || || | || || ||| |||| Sbjct 988120 TTGGCGACTTGGAATTCACCGGCAAGGACCCGGCGGGTGTAAAGATTGGATGTGTAGGGC 988179 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| ||| || ||||| | ||| | ||||| |||||| || ||| Sbjct 988180 TCGAAGCATTCGTTGAAGCCGAGCATTTGTGAGGTAGAGGCGGTAGGCATGGGGGCGACC 988239 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| ||||||||| ||| | |||||| || | |||| ||||| Sbjct 988240 AGGAGCGAGTTGCGCACGCCGTGCTTGCTGACTTGTTCCTTGAGGGCGGCCCAGTCCCAG 988299 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || || | || ||||||||||||||||| || || || | | | ||||| Sbjct 988300 AGGTCGGTAGGAGTGACATCCCACATGTCGTACTGGAAGATACCTTTGGACACAGGGCTT 988359 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| ||| |||| | || || | ||| ||||| | |||| | Sbjct 988360 CCTTCGTAGGTTTCGTAA--GGACCGAGCTCACGGGCCAGCTCCATTGAGGTTTCCATGG 988417 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 || || ||||| || || ||||| | ||| | |||| | ||||| || || Sbjct 988418 CGGCGTGGTAAATAGTTTCAAAGATTTGACGGTTCAACAGCTTGGCTTCGTCTGATTCAA 988477 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | || ||||| ||| | ||| |||||||| || || || | || | || ||||| | Sbjct 988478 AGGGATAGCGCATCAGCATAAAGGCATCGGCCAGACCTTGGACACCGAGACCAATGGGGC 988537 Query 145476 GATGTTTCATGTT-----GCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530 | || | |||| | || ||||| ||| | ||| | | ||| |||||| Sbjct 988538 GGTGACGCTTGTTGGAGCGTTCGGCCTCGATGACAGGGTAGTA-GTTGAT----GTCGAT 988592 Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590 || || |||| ||| || | ||||| || | | ||| ||| | ||||||||| Sbjct 988593 GATCTTGTTCAGGTTGCGGGTAATGACCTTGGTGACGGCATGCAGCTTCTTAAAGTCAAA 988652 Query 145591 CCGAGCCTCGTCAACGACCACACAGCTATTGACG-GCGATCGACGCCAAATTACAAACTG 145649 ||| || ||| ||| || | || | ||||| |||| || || || | Sbjct 988653 -AGAGGTGCG--GTTGACGACATAG-GAGGGAAGAGCGATACTGGCCAGGTTGCACACGG 988708 Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709 | | || || | | | ||| | || || |||| |||| || || || ||||||| Sbjct 988709 CGATTTCATCAGGGCTGGAGTACTCGACAATTTCGGTACACAGGTTACTGCACTTGATGG 988768 Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769 | || || ||||| || || ||| | |||||| || || || || ||||| | || Sbjct 988769 TGCCGAGGTTTTGTTGGTTGGATTTGCGGTTGCAGGCATCTTTATACAGCATAAAGGGGT 988828 Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTG 145827 ||| || || || | |||| ||| || || || | || || | | Sbjct 988829 TGCCGGTTTCGGTTTGGGCTTCCATGAT--GGCGTACCACAGCTTTTGGGCCTTGATCGT 988886 Query 145828 CTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887 || | ||||| |||| |||||| || ||||| || || | || | Sbjct 988887 TTGGCGAGCACGGCCTTCTTGTTCGTAGCGGGCATACAGCTCTTCGAATTCATCGCCCCA 988946 Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947 ||| ||| || || | ||||||||| | ||||||||| |||||||||| | Sbjct 988947 TACTTCGTGCAGACCAGGGGCTTCGTTGGGACAGAACAGCGACCACTCGCCGTTGGCTTC 989006 Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCA 146007 || |||| ||| || | ||| |||||||||||||| || | || || || || | Sbjct 989007 CACACGCTTCATGAAGAGATCAGGCACCCACAGCGCATAGAACAGATCACGGGCACGGAT 989066 Query 146008 ATCCTCAGCACCCATGTT-TCGC-----TTCAAATTAAGCACACTATAGATGTCCGCGTG 146061 || || || | ||| | || | |||| ||| | ||| || ||||| Sbjct 989067 TTCGTCCTTGCCGACGTTCTTGCGAAGGTCCAAA--AAG----GTGAAGACATCGGCGTG 989120 Query 146062 CCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTG 146118 ||| ||||| | || | ||| | || || || |||||||| || || |||| Sbjct 989121 CCAAGGTTCCAGGTACATGGCAAAAGCACCGGGACGCTTGTTGCCACCTTGATCGACGTA 989180 Query 146119 ACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT 146178 || | ||||||| ||||| || | ||||||| || ||| ||| |||||| || Sbjct 989181 GCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGCAGGAGACCGTTGGAGTAGCCGTTGGT 989240 Query 146179 ---AG-AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGC 146234 || | | || | ||| || || | | || | || | || | |||| Sbjct 989241 GCCAGCAATGTA----AGAGCCAGTGGCACGGATGTTGTGGATGTTGAGACCAATGCCGC 989296 Query 146235 CGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAAT--GCT 146292 | || |||||| || ||| || ||| || ||||||||||| || || | Sbjct 989297 CAGCGGTCTTGGAGATTTGGGCACAAGACTTGAGGGTTTCGTAGATGCCTTCGATCGAGT 989356 Query 146293 ATCGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGA 146352 | |||| ||| | || ||||||||| |||| || | ||||| || || Sbjct 989357 CTTCCTTC--ATGGTCAAGAGGAAGCACGAGGACATTTGAGGACGAGGCGTGCCGGCGTT 989414 Query 146353 GAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGA 146411 ||| | ||| ||||| || || || || | |||| ||||| | || ||||| | Sbjct 989415 GAAGAGCGTAGGGCTGGCATGGGTGAAGAAGCGCTCGG-ACATCAATTGGTAGGTTTCCA 989473 Query 146412 TAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGG 146471 ||| | | ||||||||||| ||||| || | || || ||||||| || |||||| | Sbjct 989474 AAGCAGCATCGATGTCGTCGCCGTGAATCCCGACGGCCACACGCATGATCAAGTGTTGAG 989533 Query 146472 GCCGCTCCGCCACTT---GATTGTCAATCTTTAACAAATA--GCCGTTCTCCAGGGTTTT 146526 | ||||| ||||||| |||| ||||| | |||||| |||| ||||| ||||| Sbjct 989534 GACGCTCAGCCACTTTCCCATTG---ATCTTGAGCAAATAAGACCGT--TCCAGAGTTTT 989588 Query 146527 GTATCCGAAAAATTTGTA 146544 | | || || | ||||| Sbjct 989589 GAAGCCAAAGTAGTTGTA 989606 >seq21 Length=571097 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | || || || ||||| |||||||| || Sbjct 539643 CCACCACGGAGACGGAGCACAAGGTGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAG 539702 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| || |||| | ||| || ||||| |||||| Sbjct 539703 AGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGG 539762 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| ||| || ||||||| | || | || || | ||| || | Sbjct 539763 ATGCCTTCTTTGTCTTGGATCTTTTGCTTGACGTTATCAATAGAGTCCGAGGATTCAACT 539822 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || || || || || || ||||| Sbjct 539823 TCGAGAGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 539869 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | || || || ||||| |||||||| || Sbjct 539871 CCACCACGGAGACGGAGCACAAGGTGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAG 539930 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| || |||| | ||| || ||||| |||||| Sbjct 539931 AGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGG 539990 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| || || ||||||| | || | | || | ||| || | Sbjct 539991 ATGCCTTCTTTGTCTTGAATCTTTTGCTTGACGTTGTCAATTGAGTCCGAGGATTCAACT 540050 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| |||| || || || || || || || ||||| || ||||||| Sbjct 540051 TCGAGAGTAATAGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCATGA 540099 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || || || | ||| || || || || |||||||| || Sbjct 539414 GCCACCACGGAGGCGAAGGACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGA 539473 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || || ||||||||||| || |||| | ||| || ||||| ||||| Sbjct 539474 GAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGG 539533 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||||||||| ||| || ||||||| | || | | || | ||| || | Sbjct 539534 GATGCCTTCTTTGTCTTGGATCTTTTGCTTGACGTTGTCAATTGAGTCCGAGGATTCAAC 539593 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || || || || || || ||||| Sbjct 539594 TTCGAGAGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 539641 >seq34 Length=381833 Score = 89.7 bits (98), Expect = 5e-13 Identities = 134/188 (71%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 46123 TGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAG 46182 |||||| ||||| |||| | |||| || || || ||||||||||||| ||| || Sbjct 50116 TGGATCTCCAGCAACACCTC--CTTT-GCTGAACGCTTGGTGGCCTTTGCTGCTGTCGAA 50060 Query 46183 GGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATG 46242 || | || || || ||| |||||| ||||||| | | || | |||| | ||| Sbjct 50059 GGTATTTTCTTCTCGGGCGCCTTTGCCTCCATCTTCTGGTTGAAGAAGCGGGGCTTGATG 50000 Query 46243 CCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTT 46302 || || |||| || |||||| ||||| | |||||||| ||||| || || |||||| Sbjct 49999 CCTGGTTTGACCTTCTCCAACGAACTGATTTGCCGCGACGAAGGCCTCCACACCGACTTT 49940 Query 46303 GCGTGTCT 46310 || ||||| Sbjct 49939 GCCTGTCT 49932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012127381760