Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq38 188 9e-43 >seq38 Length=1275103 Score = 188 bits (208), Expect = 9e-43 Identities = 747/1164 (64%), Gaps = 20/1164 (2%) Strand=Plus/Plus Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 || || || || || ||||| ||||||||||| || | |||||||| || || | Sbjct 988738 ATTTCGGTACACAGGTTACTGCACTTGATGGTGCCGAGGTTTTGTTGGTTGGATTTGCGG 988797 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 || || ||||| ||||| || || || || | || ||||| | || | ||| || || Sbjct 988798 TTGCAGGCATCTTTATACAGCATAAAGGGGTTGCCGGTTTCGGTTTGGGCTTCCATGATG 988857 Query 62921 GCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT-ATCTCTT--TTCTCTTTCGTAT 62977 || | ||| | | | ||||| || | || | | | | |||| |||||| Sbjct 988858 GCGTACCACAGCTTTTGGGCCTTGATCGT---TTGGCGAGCACGGCCTTCTTGTTCGTAG 988914 Query 62978 AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCC 63037 | | ||||| |||||| || || ||||| || | || ||| ||||| ||| | Sbjct 988915 CGGGCATACAGCTCTTCGAATTCATCGCCCCATACTTCGTGCAGACCAGGGGCTTCGTTG 988974 Query 63038 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63097 ||||| | || ||||||||| |||| | | ||| || ||||| ||||||||||| | | Sbjct 988975 GGACAGAACAGCGACCACTCGCCGTTGGCTTCCACACGCTTCATGAAGAGATCAGGCACC 989034 Query 63098 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156 || || || ||| || ||||| | || | ||| || || || ||||| ||| Sbjct 989035 CACAGCGC-ATAGAACAGATCACGGGCACGGATTTCGTCCTTGCCGACGTTCTTGCGAAG 989093 Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || | || | | | ||| | ||||| ||||||| ||| ||||| | | | || || Sbjct 989094 GTCCAAAAAGGTGAAGACATCGGCGTGCCAAGGTTCCAGGTACATGGCAAAAGCACCGGG 989153 Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 || ||||| || || ||||| | ||| | || ||||| || | |||| | ||| || Sbjct 989154 ACGCTTGTTGCCACCTTGATCGACGTAGCGGGCAGTGTTGTTGAAGACTCGGAGCATGGG 989213 Query 63277 AATAATACCATTGGATGTA-CCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATAT 63335 | | ||| ||||| ||| || ||||| || | || || ||| ||||||| || | Sbjct 989214 CAGGAGACCGTTGGA-GTAGCCGTTGGTGCCAGCAATGTAAGAGCCAGTGGCACGGATGT 989272 Query 63336 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63395 | || ||||| || || || || | || |||||| || || || | | Sbjct 989273 TGTGGATGTTGAGACCAATGCCGCCAGCGGTCTTGGAGATTTGGGCACAAGACTTGAGGG 989332 Query 63396 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 63455 | || |||||||| || || || ||| ||||| | | || || || ||||||| Sbjct 989333 TTTCGTAGATGCCTTCGATCGAGTCTTCCTTCATGGTCAAGAGGAAGCACGAGGACATTT 989392 Query 63456 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAG 63515 | ||||| || || || || || | ||||| || || || || | || | Sbjct 989393 GAGGACGAGGCGTGCCGGCGTTGAAGAGCGTAGGGCTGGCATGGGTGAAGAAGCGCTCGG 989452 Query 63516 AAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGA 63575 | | | | ||| || || | ||| | || || || ||||| || || || | Sbjct 989453 ACATCAATTGGTAGGTTTCCAAAGCAGCATCGATGTCGTCGCCGTGAATCCCGACGGCCA 989512 Query 63576 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGG 63635 ||||||| | || ||| ||||| | ||| | | || || || || | ||| || | Sbjct 989513 CACGCATGATCAAGTGTTGAGGACGCTCAGCCACTTTCCCATTGATCTTGAGCAAATAAG 989572 Query 63636 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 63695 | ||||| |||||| || ||||| |||||||| ||| || || || || || || Sbjct 989573 ACCGTTCCAGAGTTTTGAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCATAGATGATGG 989632 Query 63696 CCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA----TACTTGAAATA 63751 | || ||||| ||| | ||| | || | | |||||| | || || Sbjct 989633 CTGAATTGAGACGATCGGCGTTCTTGATGACAA----CTTGGTAAGTGGTGTCCGAGATC 989688 Query 63752 ATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCA 63811 || || | ||||| || | || || |||| |||| | | || || || | |||| Sbjct 989689 ATGGGCGAGTGTTTGCCCGTCTTGGGGTTGATATAGGTATACAAGTCTTCGACGACTTGC 989748 Query 63812 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATG 63871 || | ||||| ||||||||||| || || || | || || | || || | || Sbjct 989749 GAGAACACCTTTTTGGTTTCTTTGTGCAGGTTGGAGATAGCAATACGGGCAGCCAAGATA 989808 Query 63872 GCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAA 63930 ||||| || ||||| ||| | || || || || |||| || || ||| ||||||| Sbjct 989809 GCATAGTCAGGATG-GGTGGTGGTCATGTAAGCAGCCGTTTCAGCAGCAAGATTGTCCAA 989867 Query 63931 TTCTACCGTTGTTACACCATTATA 63954 ||| || || || ||||| | ||| Sbjct 989868 TTCCACAGTGGTCACACCTTGATA 989891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631097074400