Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq38 242 4e-59 seq56 104 3e-17 seq25 100 3e-16 seq34 96.9 4e-15 >seq38 Length=1275103 Score = 242 bits (268), Expect = 4e-59 Identities = 1112/1740 (64%), Gaps = 38/1740 (2%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || || |||||||| |||||||| || |||| ||||||| | || | ||||| |||| | Sbjct 987814 CGCAGATAGTACATACCCGTCTTCAGACCCTTCTTCCAGCCGTAAAAGTGCATGGAGGTC 987873 Query 113657 AACTTGGAGAGTGTTGGACTTTCCA-TGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 | |||| | ||| | | ||| |||| | ||| | |||||||||||||||||| || Sbjct 987874 AGCTTGCCAAA-GTTAGGCACGCCAATGAACACGTTGAGACTTTGGGATTGATCGATAAA 987932 Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTTC 113774 | ||||| || || |||||||| || | | | | |||||||||||| || Sbjct 987933 GGCACCACGGTCGGCAGCCATATCGATGAGGGTGCGTTGGGA-GATTTCCCACACGGTCT 987991 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCAC---CCG 113831 |||||| | || | | ||| ||||| | ||| | |||| ||||| | | Sbjct 987992 TGTAGATGGCTTTGAGGTTATCGGGGATGTTGGGGATGTGCTGGACAGAGCCGTTGTCGG 988051 Query 113832 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 113891 | ||| || | | ||| || || | ||||| |||| || || |||| | Sbjct 988052 ACATGA---TGCGGTTCTTGATTTCATCATTCCAGATGCCAAGCTCCACCAGGTCCTTGA 988108 Query 113892 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 113951 || ||| | || || ||||| || ||| || | || | ||||| Sbjct 988109 GCAGCCAGGGGTTGGCGACTTGGAATTCACCGGCAAGGACCCGGCGGGTGTAAAGATTGG 988168 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011 ||||| ||||| ||||| || ||| || | ||||| | ||| ||||| || |||| Sbjct 988169 ATGTGTAGGGCTCGAAGCATTCGTTGAAGCCGAGCATTTGTGAGGTAGAGGCGGTAGGCA 988228 Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT 114071 |||| || | || || ||| || | || | | || | |||||||||||||| Sbjct 988229 TGGGGGCGACCAGGAGCGAGTTGCGCACGCCGTGCTTGCTGACTTGTTCCTTGAGGGCGG 988288 Query 114072 CCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 114131 ||||||| || | | | | | |||||| || |||||| |||||||| || Sbjct 988289 CCCAGTCCCAGAGGTCGGTAGGAGTGACATCCCACATGTCGTACTGGAAGATACCTTTGG 988348 Query 114132 AGGCTGGCGATCCCTCAAATGTCTCGTATGGGCC---CTCAACCTCC-GC-CAATTCGGA 114186 | | || ||| || | || ||||| || || |||| || || | ||| || Sbjct 988349 ACACAGGGCTTCCTTCGTAGGTTTCGTAAGGACCGAGCTCACGGGCCAGCTCCATT--GA 988406 Query 114187 GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGC 114246 | | || | ||| ||||| || || || ||||| || || |||| |||||| Sbjct 988407 GGTTTCC---ATGGCGGCGTGGTAAATAGTTTCAAAGATTTGACGGTTCAACAGCTTGGC 988463 Query 114247 CTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACAC 114305 ||||| || ||||| | || ||| || ||||| |||| || ||||||||||||| Sbjct 988464 TTCGTCTGATTCAAAGG-GATAGCGCATCAGCATAAAGGCATCGGCCAGACCTTGGACAC 988522 Query 114306 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGATAAA 114362 |||| ||||| ||||| || | | | || || || ||| ||| | | || || Sbjct 988523 CGAGACCAATGGGGCGGTGACGCTTGTTGGAG---CGTTCGGCCTCGATGACAGGGTAGT 988579 Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422 | || | ||||| | | | || || || ||| | ||||| |||| |||| |||| Sbjct 988580 AGTTGATGTCGATGATCTTGTTCAGGTTGCGGGTAATGACCTTGGTGACGGCATGCAGCT 988639 Query 114423 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 114482 | | | |||||| | | | | || | |||||| ||||| ||||| |||| Sbjct 988640 TCTTAAAGTCAAAAGAG-GTG-CGGTTGAC-GACATAGGAGGGAAGAGCGATACTGGCCA 988696 Query 114483 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 114542 | || ||||| | | | ||||| | |||||| | |||||| ||||||| || Sbjct 988697 GGTTGCACACGGCGATTTCATCAGGGCTGGAGTACTCGACAATTTCGGTACACAGGTTAC 988756 Query 114543 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 114602 | ||| |||||||| | ||| | ||| || || || ||| || ||||| || || | Sbjct 988757 TGCACTTGATGGTGCCGAGGTTTTGTTGGTTGGATTTGCGGTTGCAGGCATCTTTATACA 988816 Query 114603 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCG 114661 |||| | || | || || || ||||||| | | || || | ||| | | | | | Sbjct 988817 GCATAAAGGGGTTGCCGGTTTCGGTTTGGGCTTCCATGATGGCGTACCACAGCTTTTGGG 988876 Query 114662 GCTGGCACAGT-GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAA 114720 || | | | |||| || || || || | ||||| | || || |||| || Sbjct 988877 CCTTGATCGTTTGGCGA--GCACGGCCTTCTTGTTCGTAGCGGGCATACAGCTCTTCGAA 988934 Query 114721 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 114780 || || ||| | || || || || || | | || ||||| || ||||| | Sbjct 988935 TTCATCGCCCCATACTTCGTGCAGACCAGGGGCTTCGTTGGGACAGAACAGCGACCACTC 988994 Query 114781 ACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATC 114840 || | || ||||||||||||||||| || || | ||| || || |||| ||||| Sbjct 988995 GCCGTTGGCTTCCACACGCTTCATGAAGAGATCAGGCACCCACAGCGCATAGAACAGATC 989054 Query 114841 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 114900 || || ||| || | || || || | ||||||||| | || ||| Sbjct 989055 ACGGGCACGGATTTCGTCCTTGCCGACGTTCTTGCGAAGGTCCAAAAAGGTGAAGACATC 989114 Query 114901 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA---CCAGCCTGGTT 114957 |||||||| ||||||||||||| || | | || ||| ||| | || | Sbjct 989115 GGCGTGCCAAGGTTCCAGGTACATGGCAAAAGCACCGGGACGCTTGTTGCCACCTTGATC 989174 Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017 || || | || ||| || || || || ||||| || | || ||| | || | ||| Sbjct 989175 GACGTAGCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGCAGGAGACCGTTGGAGTAGCC 989234 Query 115018 ATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACC 115077 || || || ||| ||| | |||| | || | ||||||| | |||||| || Sbjct 989235 GTTGGTGCCAGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTTGAGACCAATGCC 989294 Query 115078 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGA 115137 || || ||| |||||||| || || | |||| | ||||||| || |||||||| Sbjct 989295 GCCAGCGGTCTTGGAGATTTGGGCACAAGACTTGAGGGTTTCGTAGATGCCTTCGATCGA 989354 Query 115138 GTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 115197 ||| |||| | | | |||||||| |||||||| || | || || || ||||| Sbjct 989355 GTCTTCCTTCATGGTCAAGAGGAAGCACGAGGACATTTGAGGACGAGGCGTGCCGGCGTT 989414 Query 115198 GAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAA 115257 |||||| || || | || ||| |||| | | | ||||||| | |||||| ||||| Sbjct 989415 GAAGAGCGTAGGGCTGGCATGGGTGAAGAAGCGCTCGGACATCAATTGGTAGGTTTCCAA 989474 Query 115258 GACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 | || ||||| || |||||||| |||| | || ||||| | || || ||| || Sbjct 989475 AGCAGCATCGATGTCGTCGCCGTGAATCCCGACGGCCACACGCATGATCAAGTGTTGAGG 989534 >seq56 Length=149020 Score = 104 bits (114), Expect = 3e-17 Identities = 261/394 (66%), Gaps = 2/394 (1%) Strand=Plus/Minus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || ||||| ||| |||| || ||| ||||| || |||| | |||||||| || Sbjct 79083 TACCAAGCCTCTACCTCTGAATTGTACGGTAAGGTGGTGGAAACTCCTCAAAAGGAAACC 79024 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGT 8644 || |||||||| || || || |||||| || | ||| | | ||| | ||| |||| Sbjct 79023 ACTCCCTTCTACCCTCGTTCTCCCTATGGTGTGGCCAAGCTGTACGGTT-ACTGGATCGT 78965 Query 8645 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGA 8704 || ||||| |||||||| | ||||| || ||||||||| ||||||||||| Sbjct 78964 TGTCAACTACCGTGAATCCTACAACATGTTTGCCTGTAACGGTATTCTGTTCAACCACGA 78905 Query 8705 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAAT 8764 || ||||| ||||||| || || || ||||||||| || || | || Sbjct 78904 ATCTCCCCGCCGTGGCCGTACCTTTGTCACCCGCAAGATCACCCGTGCCGTCGCTGACAT 78845 Query 8765 CGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGG 8824 | ||| || | | | | ||||| ||| || | ||| || | || ||||| Sbjct 78844 CCATTTGGGCCGTCAAGAATGCTTGTACTTGGGTAACATCGATGCCAAGCGTGATTGGGG 78785 Query 8825 ACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGA 8884 || ||| |||||||| |||| |||||| | | | ||||||||||| || || || Sbjct 78784 TCATGCCCGTGACTATGTCGAAGGTATGTGGTTGATGTTGCAACAAGAAGAAGCCGATGA 78725 Query 8885 ATATGTCGTCGCGACGGGGGAGACACACTCCGTC 8918 | |||| | || || || || || ||| | ||| Sbjct 78724 CTTTGTCTTGGCCACCGGTGAAACCCACACTGTC 78691 >seq25 Length=485700 Score = 100 bits (110), Expect = 3e-16 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 113593 TGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGA 113652 |||||| ||||||||||| || |||||||| |||| |||||||| || | ||||| || Sbjct 239079 TGATCGTAGGTAGTACATGCCGGTCTTGAGGCCCTTTTTCCAGGCGTAAAAGTGCATGGA 239020 Query 113653 GGACAACTTGGAGAGTGTTGGACTTTCCA-TGAAGAGGTTCATACTTTGGGATTGATCGA 113711 || || |||| | || || || ||| |||| | |||||| |||||| ||||||| Sbjct 239019 GGTCAGCTTGCCAAAGGTAGG-CTCGCCAGTGAACAAGTTCATGGATTGGGACTGATCGA 238961 Query 113712 TGAAGCGTCCACGATCCGCCGCCATATCAATCA-CATCC-TTCATCTTGATTTCCCACAC 113769 | || |||||||| || ||||| || || | || || || | |||||||||||| Sbjct 238960 TAAAAGCACCACGATCGGCAGCCATGTCGATGATCACCCGTTGA--GAGATTTCCCACAC 238903 Query 113770 AGTTCTGTAGAG 113781 || |||| || Sbjct 238902 GGTCTTGTAAAG 238891 >seq34 Length=381833 Score = 96.9 bits (106), Expect = 4e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || |||||| || ||||| ||| | || ||||| || |||||| || || Sbjct 49937 GGCAAAGTCGGTGTGGAGGCCTTCGTCGCGGCAAATCAGTTCGTTGGAGAAGGTCAAACC 49996 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| | |||||||||||||||||||| || | ||| | ||||||||||| || Sbjct 49997 AGGCATCAAGCCCCGCTTCTTCAACCAGAAGATGGAGGCAAAGGCGCCCGAGAAGAAAAT 50056 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208 || || ||| || || || | | || |||||||||||| Sbjct 50057 ACCTTCGACAGCAGCAAAGGCCACCAAGCGTTCAGCAAAGGAG 50099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352748771120